RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SP6Q3SY56 376 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 SSX9Q7RTT3 188 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 TMEM167AQ8TBQ9 72 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 WNT10AQ9GZT5 417 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 TMEM222Q9H0R3 208 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 ZNF580Q9UK33 172 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 TBC1D24Q9ULP9 559 aa16.94■□□□□ 0.3
NEK3-202ENST00000550841 MARCH11A6NNE9 402 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 OR5AC1P0C628 307 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 SLC35B1P78383 322 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 TMEM267Q0VDI3 215 aaPredicted RBP16.93■□□□□ 0.3
NEK3-202ENST00000550841 FXYD3Q14802 87 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 OR4A47Q6IF82 309 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 SLC25A42Q86VD7 318 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 C3orf56Q8N813 242 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 TMEM230Q96A57 120 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 TPSG1Q9NRR2 321 aa16.93■□□□□ 0.3
NEK3-202ENST00000550841 LINC01548A6NM66 108 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 CDS2O95674 445 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 TCRBP04435 133 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 FGF2P09038 288 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 G6PCP35575 357 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 GNB1P62873 340 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 IFITM3Q01628 133 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 TMEM95Q3KNT9 176 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 ZNF695Q8IW36 515 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 STPG2Q8N412 459 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 KLHDC1Q8N7A1 406 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 ABHD5Q8WTS1 349 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 GLYATL2Q8WU03 294 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 ZNF430Q9H8G1 570 aaPredicted RBP16.92■□□□□ 0.3
NEK3-202ENST00000550841 PARP11Q9NR21 331 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 TMEM140Q9NV12 185 aa16.92■□□□□ 0.3
NEK3-202ENST00000550841 UPK2O00526 184 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 SNAPC5O75971 98 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 IL6RP08887 468 aaPredicted RBP16.91■□□□□ 0.3
NEK3-202ENST00000550841 VDAC1P21796 283 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 RPL8P62917 257 aaKnown RBP16.91■□□□□ 0.3
NEK3-202ENST00000550841 SRPXP78539 464 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 PJVKQ0ZLH3 352 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 TNXAQ16473 311 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 H2BFWTQ7Z2G1 175 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 ARPC1AQ92747 370 aa16.91■□□□□ 0.3
NEK3-202ENST00000550841 PSMB11A5LHX3 300 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 ARPC1BO15143 372 aaKnown RBP16.9■□□□□ 0.3
NEK3-202ENST00000550841 ATP6V0E1O15342 81 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 CRIP2P52943 208 aaPredicted RBP16.9■□□□□ 0.3
NEK3-202ENST00000550841 TMEM187Q14656 261 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 SGMS2Q8NHU3 365 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 ENKURQ8TC29 256 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 IL22RA2Q969J5 263 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 RRNAD1Q96FB5 475 aaKnown RBP16.9■□□□□ 0.3
NEK3-202ENST00000550841 SEC22AQ96IW7 307 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 TMEM68Q96MH6 324 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 TMEM56Q96MV1 263 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 NOL4LQ96MY1 436 aaPredicted RBP16.9■□□□□ 0.3
NEK3-202ENST00000550841 ZNF747Q9BV97 191 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 FKBP11Q9NYL4 201 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 TMEM56-RWDD3S4R434 201 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 PLXNB1O43157 2135 aa16.9■□□□□ 0.3
NEK3-202ENST00000550841 IGKV1-39P01597 117 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 IGKV1D-39P04432 117 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 HLA-GP17693 338 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 VAMP1P23763 118 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 SUPT4H1P63272 117 aaKnown RBP16.89■□□□□ 0.29
NEK3-202ENST00000550841 MRGPRG-AS1Q2M3A8 158 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 AKIRIN2Q53H80 203 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 LGI3Q8N145 548 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 COMMD1Q8N668 190 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 WFDC12Q8WWY7 111 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 RBPMSQ93062 196 aaKnown RBP16.89■□□□□ 0.29
NEK3-202ENST00000550841 ALX4Q9H161 411 aaPredicted RBP16.89■□□□□ 0.29
NEK3-202ENST00000550841 LINC00527Q9UJ94 153 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 FLVCR2Q9UPI3 526 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 NUBP2Q9Y5Y2 271 aa16.89■□□□□ 0.29
NEK3-202ENST00000550841 TRAV41A0A0B4J266 112 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 SFT2D2O95562 160 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 AKR1C2P52895 323 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 RAB25P57735 213 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 FAM219AQ8IW50 185 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 SELENOHQ8IZQ5 122 aaKnown RBP16.88■□□□□ 0.29
NEK3-202ENST00000550841 OR5AU1Q8NGC0 362 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 RNASE11Q8TAA1 199 aaKnown RBP16.88■□□□□ 0.29
NEK3-202ENST00000550841 GRPEL2Q8TAA5 225 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 SPIN2AQ99865 258 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 SPIN2BQ9BPZ2 258 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 C20orf85Q9H1P6 137 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 PRNDQ9UKY0 176 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 TNCP24821 2201 aa16.88■□□□□ 0.29
NEK3-202ENST00000550841 EGR2P11161 476 aaPredicted RBP16.87■□□□□ 0.29
NEK3-202ENST00000550841 PPP1R1AQ13522 171 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 TMEM268Q5VZI3 342 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 SHISA2Q6UWI4 295 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 DUSP18Q8NEJ0 188 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 OR4X2Q8NGF9 303 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 OR4A16Q8NH70 328 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 SRSF12Q8WXF0 261 aaKnown RBP16.87■□□□□ 0.29
NEK3-202ENST00000550841 PHB2Q99623 299 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 COMMD5Q9GZQ3 224 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 PALMDQ9NP74 551 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms