RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 OR1S2Q8NGQ3 325 aa12.14□□□□□ -0.47
SREK1-209ENST00000520953 RPEQ96AT9 228 aa12.14□□□□□ -0.47
SREK1-209ENST00000520953 DPM3Q9P2X0 92 aa12.14□□□□□ -0.47
SREK1-209ENST00000520953 KRBOX1C9JBD0 128 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 KRASP01116 189 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 FAM157CP0CG43 387 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 G6PCP35575 357 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 THBS3P49746 956 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 PLEKHA2Q9HB19 425 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 NUP50Q9UKX7 468 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 CYSRT1A8MQ03 144 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 IL3RAP26951 378 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 KRTAP1-1Q07627 177 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 Q6ZRM9 215 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 SSX9Q7RTT3 188 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 STPG2Q8N412 459 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 OR5AN1Q8NGI8 311 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 BSCL2Q96G97 398 aaPredicted RBP12.13□□□□□ -0.47
SREK1-209ENST00000520953 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
SREK1-209ENST00000520953 RCL1Q9Y2P8 373 aaKnown RBP12.13□□□□□ -0.47
SREK1-209ENST00000520953 SRRM4A7MD48 611 aaKnown RBP12.12□□□□□ -0.47
SREK1-209ENST00000520953 TIMM23O14925 209 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 NPFFO15130 113 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 RAB13P51153 203 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 DMBX1Q8NFW5 382 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 RNF141Q8WVD5 230 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
SREK1-209ENST00000520953 POMT1Q9Y6A1 747 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 HIVEP1P15822 2718 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 IGHV1-69DA0A0B4J2H0 117 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 H7C2Y5 167 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 NXPH3O95157 252 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 IGHV1-69P01742 117 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 EPHA1P21709 976 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 TAGLNQ01995 201 aaKnown RBP12.12□□□□□ -0.47
SREK1-209ENST00000520953 CYB5R2Q6BCY4 276 aa12.12□□□□□ -0.47
SREK1-209ENST00000520953 TMA7Q9Y2S6 64 aaKnown RBP12.12□□□□□ -0.47
SREK1-209ENST00000520953 CUBNO60494 3623 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
SREK1-209ENST00000520953 LGALS4P56470 323 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 EIF5AP63241 154 aaKnown RBP12.11□□□□□ -0.47
SREK1-209ENST00000520953 NMSQ5H8A3 153 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 FAM71F2Q6NXP2 309 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 C22orf15Q8WYQ4 148 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 GPR146Q96CH1 333 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 C11orf1Q9H5F2 150 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 DUXBA0A1W2PPF3 345 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 GPR137BO60478 399 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 CNTFRP26992 372 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 P2RY1P47900 373 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 CFHR4Q92496 578 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 SMR3AQ99954 134 aa12.11□□□□□ -0.47
SREK1-209ENST00000520953 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 AKR1C2P52895 323 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 FAM120AOSQ5T036 256 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 IL17RELQ6ZVW7 336 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 R3HDM4Q96D70 268 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 ADTRPQ96IZ2 230 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
SREK1-209ENST00000520953 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 JTBO76095 146 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 VDAC1P21796 283 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 GATA3P23771 443 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 GPR157Q5UAW9 335 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 BCL6BQ8N143 479 aaPredicted RBP12.09□□□□□ -0.47
SREK1-209ENST00000520953 OR4S2Q8NH73 311 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 IL22RA2Q969J5 263 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 WFDC1Q9HC57 220 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 TNCP24821 2201 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 MDFIC2A0A1B0GVS7 189 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 ZNF705EA8MWA4 302 aaPredicted RBP12.09□□□□□ -0.47
SREK1-209ENST00000520953 RBFOX2O43251 390 aaKnown RBP eCLIP12.09□□□□□ -0.471e-7■□□□□ 11.2
SREK1-209ENST00000520953 HPRT1P00492 218 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 P0C879 139 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 NKX2-1P43699 371 aaPredicted RBP12.09□□□□□ -0.47
SREK1-209ENST00000520953 POLR2GP62487 172 aaKnown RBP eCLIP12.09□□□□□ -0.47
SREK1-209ENST00000520953 HNF4GQ14541 408 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
SREK1-209ENST00000520953 MINOS1Q5TGZ0 78 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 UBAC2Q8NBM4 344 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
SREK1-209ENST00000520953 WASHC3Q9Y3C0 194 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 MINOS1-NBL1R4GNA1 71 aa12.09□□□□□ -0.47
SREK1-209ENST00000520953 MTORP42345 2549 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 PLXNB1O43157 2135 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 FBXO24O75426 580 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 APOA2P02652 100 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 OR9G9P0C7N8 305 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 MYOD1P15172 320 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms