RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ZDHHC11Q9H8X9 412 aa20.32■□□□□ 0.84
DDX41-202ENST00000503078 CMTM2Q8TAZ6 248 aa20.31■□□□□ 0.84
DDX41-202ENST00000503078 CELSR3Q9NYQ7 3312 aa20.31■□□□□ 0.84
DDX41-202ENST00000503078 M0R143 59 aa20.31■□□□□ 0.84
DDX41-202ENST00000503078 RNFT1Q5M7Z0 435 aa20.31■□□□□ 0.84
DDX41-202ENST00000503078 Q8TCH9 128 aa20.31■□□□□ 0.84
DDX41-202ENST00000503078 ARRDC1-AS1Q9H2J1 176 aa20.31■□□□□ 0.84
DDX41-202ENST00000503078 HNF1AP20823 631 aa20.3■□□□□ 0.84
DDX41-202ENST00000503078 SELENOTP62341 195 aa20.3■□□□□ 0.84
DDX41-202ENST00000503078 ZNF718Q3SXZ3 478 aa20.3■□□□□ 0.84
DDX41-202ENST00000503078 TMEM164Q5U3C3 297 aa20.3■□□□□ 0.84
DDX41-202ENST00000503078 GFRA3O60609 400 aa20.3■□□□□ 0.84
DDX41-202ENST00000503078 ZCCHC14Q8WYQ9 949 aaKnown RBP20.3■□□□□ 0.84
DDX41-202ENST00000503078 ATG101Q9BSB4 218 aa20.3■□□□□ 0.84
DDX41-202ENST00000503078 GRIFINA4D1Z8 144 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 AQP7O14520 342 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 IL17BQ9UHF5 180 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 YTHDF2Q9Y5A9 579 aaKnown RBP20.29■□□□□ 0.84
DDX41-202ENST00000503078 TRAV9-1A0A075B6T8 112 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 ZNF705FA8MVS1 300 aaPredicted RBP20.29■□□□□ 0.84
DDX41-202ENST00000503078 TIMM8AO60220 97 aaPredicted RBP20.29■□□□□ 0.84
DDX41-202ENST00000503078 ZNF705DP0CH99 300 aaPredicted RBP20.29■□□□□ 0.84
DDX41-202ENST00000503078 ZNF705BP0CI00 300 aaPredicted RBP20.29■□□□□ 0.84
DDX41-202ENST00000503078 ERVK-16P61578 105 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 ARG2P78540 354 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 ZNF90Q03938 601 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 EDDM3AQ14507 147 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 CD177Q8N6Q3 437 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 TBX15Q96SF7 602 aa20.29■□□□□ 0.84
DDX41-202ENST00000503078 HCFC1P51610 2035 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 THBS3P49746 956 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 TMPRSS7Q7RTY8 843 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 VKORC1L1Q8N0U8 176 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 GCNT2Q8N0V5 402 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 ABHD12Q8N2K0 398 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 PLPPR2Q96GM1 343 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 IL36BQ9NZH7 164 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 GNG12Q9UBI6 72 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 FRYQ5TBA9 3013 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 M0R1X1 148 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 SP9P0CG40 484 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 RELBQ01201 579 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 MORN2Q502X0 79 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 FAM234AQ9H0X4 552 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 TMEM106BQ9NUM4 274 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 TP53TG3Q9ULZ0 132 aa20.28■□□□□ 0.84
DDX41-202ENST00000503078 RAB4AP20338 218 aa20.27■□□□□ 0.84
DDX41-202ENST00000503078 GCHFRP30047 84 aa20.27■□□□□ 0.84
DDX41-202ENST00000503078 PAFAH1B2P68402 229 aa20.27■□□□□ 0.84
DDX41-202ENST00000503078 MSL2Q9HCI7 577 aa20.27■□□□□ 0.84
DDX41-202ENST00000503078 NPVFQ9HCQ7 196 aa20.27■□□□□ 0.84
DDX41-202ENST00000503078 LSM4Q9Y4Z0 139 aaKnown RBP20.27■□□□□ 0.84
DDX41-202ENST00000503078 M0R296 226 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 AGFG2O95081 481 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 CBLN1P23435 193 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 TPPP2P59282 170 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 RPL31P62899 125 aaKnown RBP20.27■□□□□ 0.83
DDX41-202ENST00000503078 Q6ZT83 130 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 SSMEM1Q8WWF3 244 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 C1orf159Q96HA4 380 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 FER1L6-AS2Q96M78 137 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 JPT1Q9UK76 154 aa20.27■□□□□ 0.83
DDX41-202ENST00000503078 TRAV3A0A0B4J244 114 aa20.26■□□□□ 0.83
DDX41-202ENST00000503078 LNP1A1A4G5 178 aa20.26■□□□□ 0.83
DDX41-202ENST00000503078 IGKV3-15P01624 115 aa20.26■□□□□ 0.83
DDX41-202ENST00000503078 IL6RP08887 468 aaPredicted RBP20.26■□□□□ 0.83
DDX41-202ENST00000503078 FZR1Q9UM11 496 aa20.26■□□□□ 0.83
DDX41-202ENST00000503078 K7EN84 100 aa20.26■□□□□ 0.83
DDX41-202ENST00000503078 PRDX2P32119 198 aa20.26■□□□□ 0.83
DDX41-202ENST00000503078 ESDP10768 282 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 EFNB3Q15768 340 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 HLA-DRB5Q30154 266 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 RPL39P5Q59GN2 51 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 FAM90A1Q86YD7 464 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 FAM216AQ8WUB2 273 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 LRRC29Q8WV35 223 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 MRPL18Q9H0U6 180 aaKnown RBP20.25■□□□□ 0.83
DDX41-202ENST00000503078 TMEM140Q9NV12 185 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 TCF19Q9Y242 345 aa20.25■□□□□ 0.83
DDX41-202ENST00000503078 YPEL1O60688 119 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 CRISP2P16562 243 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 FABP6P51161 128 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 TDGF1P3P51864 188 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 RHOBP62745 196 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 Q6ZWC4 215 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 C11orf52Q96A22 123 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 YPEL2Q96QA6 119 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 S1PR3Q99500 378 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 SEPSECSQ9HD40 501 aaKnown RBP20.24■□□□□ 0.83
DDX41-202ENST00000503078 BDP1A6H8Y1 2624 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 GPR179Q6PRD1 2367 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 TRGV8A0A0C4DH27 118 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 SLC17A3O00476 420 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 HOXC12P31275 282 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 LINC00310P59036 64 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 FAM214BQ7L5A3 538 aa20.24■□□□□ 0.83
DDX41-202ENST00000503078 C9JCJ5 164 aa20.23■□□□□ 0.83
DDX41-202ENST00000503078 MT-CO2P00403 227 aa20.23■□□□□ 0.83
DDX41-202ENST00000503078 SPATA31B1PQ5VZV4 182 aa20.23■□□□□ 0.83
DDX41-202ENST00000503078 CLCF1Q9UBD9 225 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms