RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ACTL10Q5JWF8 245 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 Q6ZN92 141 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 ZNF497Q6ZNH5 498 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 LRRC29Q8WV35 223 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 MS4A5Q9H3V2 200 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 F2Z2F3 143 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 MT-CO2P00403 227 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 FRMD6-AS1P0C7T7 363 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 CRYBB3P26998 211 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 GNG4P50150 75 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 LHX2P50458 406 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 RNF151Q2KHN1 245 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 LBHQ53QV2 105 aaPredicted RBP10.64□□□□□ -0.71
VPS52-218ENST00000482399 ZCCHC14Q8WYQ9 949 aaKnown RBP10.64□□□□□ -0.71
VPS52-218ENST00000482399 SSBP3Q9BWW4 388 aaPredicted RBP10.64□□□□□ -0.71
VPS52-218ENST00000482399 CA1P00915 261 aaPredicted RBP10.64□□□□□ -0.71
VPS52-218ENST00000482399 OR9G9P0C7N8 305 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
VPS52-218ENST00000482399 MPV17P39210 176 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 PSG7Q13046 419 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 SSPNQ14714 243 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 TIGITQ495A1 244 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 PQLC2Q6ZP29 291 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 STARD4Q96DR4 205 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 HSPB7Q9UBY9 170 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 ABCA4P78363 2273 aa10.64□□□□□ -0.71
VPS52-218ENST00000482399 OOEPA6NGQ2 149 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 CGAP01215 116 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 NPSP0C0P6 89 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 MYOD1P15172 320 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 HLA-DRB5Q30154 266 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 FBXW9Q5XUX1 488 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 Q6P435 159 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 WDR86Q86TI4 376 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 Q8IYB0 196 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 LYG1Q8N1E2 194 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 BORCS7Q96B45 105 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 SPOCK3Q9BQ16 436 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 RNASE7Q9H1E1 156 aaKnown RBP10.63□□□□□ -0.71
VPS52-218ENST00000482399 ZNF703Q9H7S9 590 aaPredicted RBP10.63□□□□□ -0.71
VPS52-218ENST00000482399 PRDM6Q9NQX0 595 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 TRAV3A0A0B4J244 114 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 K7ESF4 209 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 GFRA1P56159 465 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 CLDN18P56856 261 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 FAM201AQ5SY85 155 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 C11orf42Q8N5U0 333 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 ZNF439Q8NDP4 499 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 ST6GALNAC3Q8NDV1 305 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 MKRN2OSH3BPM6 223 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 TOX4O94842 621 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 CLDN14O95500 239 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 IGLV2-14P01704 120 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 Q6ZSR3 168 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 ZNRF1Q8ND25 227 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 TMEM106BQ9NUM4 274 aa10.63□□□□□ -0.71
VPS52-218ENST00000482399 YLPM1P49750 1951 aaKnown RBP10.62□□□□□ -0.71
VPS52-218ENST00000482399 FOXH1O75593 365 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 IL18BPO95998 194 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 TIMP3P35625 211 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
VPS52-218ENST00000482399 SOX8P57073 446 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 MMD2Q8IY49 270 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 SEPSECSQ9HD40 501 aaKnown RBP10.62□□□□□ -0.71
VPS52-218ENST00000482399 PIEZO2Q9H5I5 2752 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 TRGV5A0A0B4J1U4 118 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 KLRC4-KLRK1H3BQV0 150 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 SPRY3O43610 288 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 GGCTO75223 188 aaKnown RBP10.62□□□□□ -0.71
VPS52-218ENST00000482399 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 ARSJQ5FYB0 599 aaPredicted RBP10.62□□□□□ -0.71
VPS52-218ENST00000482399 Q6ZS49 121 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 LINC00596Q86U02 117 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 KLF14Q8TD94 323 aaPredicted RBP10.62□□□□□ -0.71
VPS52-218ENST00000482399 PKIBQ9C010 78 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 PLXNB1O43157 2135 aa10.62□□□□□ -0.71
VPS52-218ENST00000482399 FAM90A26D6RGX4 464 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 SIAH2O43255 324 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 PLAUP00749 431 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 CD46P15529 392 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 HINT1P49773 126 aaPredicted RBP10.61□□□□□ -0.71
VPS52-218ENST00000482399 RND1Q92730 232 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 HELTA6NFD8 242 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 SRIP30626 198 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 MMDQ15546 238 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 KRTCAP3Q53RY4 240 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 PMS2CLQ68D20 193 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 TMEM208Q9BTX3 173 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 PILRBQ9UKJ0 227 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 HSBP1O75506 76 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 VENTXO95231 258 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 CXorf1O96002 111 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 APELAP0DMC3 54 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 CCL11P51671 97 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 RHOBP62745 196 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 RNPS1Q15287 305 aaKnown RBP10.61□□□□□ -0.71
VPS52-218ENST00000482399 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
VPS52-218ENST00000482399 RNASEH2CQ8TDP1 164 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms