RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 DERL1Q9BUN8 251 aa21.17■□□□□ 0.98
COL13A1-203ENST00000398969 HEYLQ9NQ87 328 aaPredicted RBP21.17■□□□□ 0.98
COL13A1-203ENST00000398969 PRR14LQ5THK1 2151 aa21.17■□□□□ 0.98
COL13A1-203ENST00000398969 SRRM5B3KS81 715 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 YPEL1O60688 119 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 NDUFB4O95168 129 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 MZT1Q08AG7 82 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 ASCL5Q7RTU5 278 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 YPEL2Q96QA6 119 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 DUSP13Q9UII6 198 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 RBFOX2O43251 390 aaKnown RBP eCLIP21.16■□□□□ 0.98
COL13A1-203ENST00000398969 CD99P14209 185 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 PDLIM3Q53GG5 364 aaPredicted RBP21.16■□□□□ 0.98
COL13A1-203ENST00000398969 MGST2Q99735 147 aa21.16■□□□□ 0.98
COL13A1-203ENST00000398969 AURKAIP1Q9NWT8 199 aaPredicted RBP21.16■□□□□ 0.98
COL13A1-203ENST00000398969 F6UZH7 168 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 GFRA3O60609 400 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 ZNF134P52741 427 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 LCN2P80188 198 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 RELBQ01201 579 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 FAM78BQ5VT40 261 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 FAM216AQ8WUB2 273 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 MS4A5Q9H3V2 200 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 PLSCR4Q9NRQ2 329 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 TRAV3A0A0B4J244 114 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 TMPRSS3P57727 454 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 LOXL3P58215 753 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 ERVK-16P61578 105 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 CR1LQ2VPA4 569 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 IFI27L2Q9H2X8 130 aa21.15■□□□□ 0.98
COL13A1-203ENST00000398969 HCFC1P51610 2035 aa21.14■□□□□ 0.97
COL13A1-203ENST00000398969 MGST3O14880 152 aa21.14■□□□□ 0.97
COL13A1-203ENST00000398969 IGHV3-13P01766 116 aa21.14■□□□□ 0.97
COL13A1-203ENST00000398969 IGHV3-7P01780 117 aa21.14■□□□□ 0.97
COL13A1-203ENST00000398969 IL3RAP26951 378 aa21.14■□□□□ 0.97
COL13A1-203ENST00000398969 UNQ6494/PRO21346Q6UXR6 183 aa21.14■□□□□ 0.97
COL13A1-203ENST00000398969 GGTLC1Q9BX51 225 aa21.14■□□□□ 0.97
COL13A1-203ENST00000398969 ARL14EPLP0DKL9 152 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 PRSS8Q16651 343 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 REC114Q7Z4M0 266 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 PXMP4Q9Y6I8 212 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 PAX1P15863 534 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 MIC13Q5XKP0 118 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 ABHD12Q8N2K0 398 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 ZNF114Q8NC26 417 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 SARAFQ96BY9 339 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 OPN3Q9H1Y3 402 aaPredicted RBP21.13■□□□□ 0.97
COL13A1-203ENST00000398969 TMEM140Q9NV12 185 aa21.13■□□□□ 0.97
COL13A1-203ENST00000398969 IGHV3OR15-7A0A075B7D8 119 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 A0A087X0M5 115 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 A0A1B0GX30 115 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 F2RL2O00254 374 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 C1QTNF9P0C862 333 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 STAG3L2P0CL84 134 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 STAG3L3P0CL85 134 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 MSMPQ1L6U9 139 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 TMEM144Q7Z5S9 345 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 PPP1R35Q8TAP8 253 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 SDSLQ96GA7 329 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 S1PR3Q99500 378 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 ZNF71Q9NQZ8 489 aaPredicted RBP21.12■□□□□ 0.97
COL13A1-203ENST00000398969 PGPEP1LA6NFU8 196 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 C1orf174Q8IYL3 243 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 GCSAMQ8N6F7 178 aa21.12■□□□□ 0.97
COL13A1-203ENST00000398969 TNFSF13O75888 250 aa21.11■□□□□ 0.97
COL13A1-203ENST00000398969 LRP11Q86VZ4 500 aa21.11■□□□□ 0.97
COL13A1-203ENST00000398969 ZNRF1Q8ND25 227 aa21.11■□□□□ 0.97
COL13A1-203ENST00000398969 PTPRZ1P23471 2315 aaPredicted RBP21.11■□□□□ 0.97
COL13A1-203ENST00000398969 RPL15P61313 204 aaKnown RBP21.11■□□□□ 0.97
COL13A1-203ENST00000398969 BHLHA15Q7RTS1 189 aaPredicted RBP21.11■□□□□ 0.97
COL13A1-203ENST00000398969 IMMP2LQ96T52 175 aa21.11■□□□□ 0.97
COL13A1-203ENST00000398969 TXNDC17Q9BRA2 123 aa21.11■□□□□ 0.97
COL13A1-203ENST00000398969 TCF19Q9Y242 345 aa21.11■□□□□ 0.97
COL13A1-203ENST00000398969 PRRC2CQ9Y520 2896 aaKnown RBP21.1■□□□□ 0.97
COL13A1-203ENST00000398969 CXorf1O96002 111 aa21.1■□□□□ 0.97
COL13A1-203ENST00000398969 ZNF600Q6ZNG1 722 aa21.1■□□□□ 0.97
COL13A1-203ENST00000398969 C1orf229Q6ZS94 237 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-203ENST00000398969 DDB2Q92466 427 aa21.1■□□□□ 0.97
COL13A1-203ENST00000398969 TRBV20OR9-2A0A075B6H5 130 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 MKRN2OSH3BPM6 223 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 SLC31A2O15432 143 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 GCGP01275 180 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 CFHR2P36980 270 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 KIR2DS2P43631 304 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 SPRNQ5BIV9 151 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 STARD4Q96DR4 205 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 C1orf159Q96HA4 380 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 PROCRQ9UNN8 238 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 CACNA1GO43497 2377 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 TET2Q6N021 2002 aaPredicted RBP21.09■□□□□ 0.97
COL13A1-203ENST00000398969 A0A0U1RQK1 487 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 ZNF320A2RRD8 509 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 CGAP01215 116 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 CNN1P51911 297 aaKnown RBP21.09■□□□□ 0.97
COL13A1-203ENST00000398969 FOXL1Q12952 345 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 UTF1Q5T230 341 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 CALYQ9NYX4 217 aa21.09■□□□□ 0.97
COL13A1-203ENST00000398969 LSM4Q9Y4Z0 139 aaKnown RBP21.09■□□□□ 0.97
COL13A1-203ENST00000398969 TRGV8A0A0C4DH27 118 aa21.08■□□□□ 0.97
COL13A1-203ENST00000398969 ZADH2Q8N4Q0 377 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms