RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RELBQ01201 579 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 MEF2BQ02080 365 aaPredicted RBP14.51□□□□□ -0.09
USH1C-205ENST00000527020 TLE1Q04724 770 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 CT45A1Q5HYN5 189 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 STUMQ69YW2 141 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 CT45A3Q8NHU0 189 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 GATAD1Q8WUU5 269 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 SDSLQ96GA7 329 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 ZFHX2Q9C0A1 2572 aaPredicted RBP14.5□□□□□ -0.09
USH1C-205ENST00000527020 AP4M1O00189 453 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 VDAC2P45880 294 aaPredicted RBP14.5□□□□□ -0.09
USH1C-205ENST00000527020 SPCS3P61009 180 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 PDLIM3Q53GG5 364 aaPredicted RBP14.5□□□□□ -0.09
USH1C-205ENST00000527020 IQCF2Q8IXL9 164 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 RAB24Q969Q5 203 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 GFOD1Q9NXC2 390 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 RNF7Q9UBF6 113 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 GAB2Q9UQC2 676 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 WDR83OSQ9Y284 106 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 ITGB1BP1O14713 200 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 CYB5R3P00387 301 aaPredicted RBP14.5□□□□□ -0.09
USH1C-205ENST00000527020 CD40P25942 277 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 TGIF2LYQ8IUE0 185 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 GAFA1Q96PS6 74 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 S1PR3Q99500 378 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 IL19Q9UHD0 177 aa14.5□□□□□ -0.09
USH1C-205ENST00000527020 KBTBD11-OT1A0A1B0GTJ5 212 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 PRSS46E5RG02 174 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 RND2P52198 227 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 TNFAIP6P98066 277 aaPredicted RBP14.49□□□□□ -0.09
USH1C-205ENST00000527020 OR52E5Q8NH55 327 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 OR4A16Q8NH70 328 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 DIRC2Q96SL1 478 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 SSX3Q99909 188 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 ZNF251Q9BRH9 671 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 ACTR3CQ9C0K3 210 aaPredicted RBP14.49□□□□□ -0.09
USH1C-205ENST00000527020 TMEM242Q9NWH2 141 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 SMG1Q96Q15 3661 aaKnown RBP14.49□□□□□ -0.09
USH1C-205ENST00000527020 CEP250Q9BV73 2442 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 RRHO14718 337 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 BMP5P22003 454 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 KRTCAP3Q53RY4 240 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 TMEM170AQ8WVE7 144 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 TMEM140Q9NV12 185 aa14.49□□□□□ -0.09
USH1C-205ENST00000527020 ZGRF1Q86YA3 2104 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 YLPM1P49750 1951 aaKnown RBP14.48□□□□□ -0.09
USH1C-205ENST00000527020 SAA2-SAA4A0A096LPE2 208 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 S100A8P05109 93 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 SAA2P0DJI9 122 aaPredicted RBP14.48□□□□□ -0.09
USH1C-205ENST00000527020 CD1BP29016 333 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 ERVK-16P61578 105 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 ZNF709Q8N972 641 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 ZNF439Q8NDP4 499 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 DCAF16Q9NXF7 216 aa14.48□□□□□ -0.09
USH1C-205ENST00000527020 GFRA3O60609 400 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 KIR2DS2P43631 304 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 PSMB3P49720 205 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 RAB7AP51149 207 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 KIAA0141Q14154 515 aaPredicted RBP14.47□□□□□ -0.09
USH1C-205ENST00000527020 ZNF674Q2M3X9 581 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 DEFB108BQ8NET1 73 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 SMIM7Q9BQ49 75 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 C17orf112F2Z3M2 114 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 CYB5BO43169 146 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 GCSAMLQ5JQS6 135 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 CYP2G1PQ6ZSU1 146 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 CCL13Q99616 98 aa14.47□□□□□ -0.09
USH1C-205ENST00000527020 TMEM250H0YL14 139 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 CLDN34H7C241 214 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 KBTBD11O94819 623 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 LY86O95711 162 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 IFNA10P01566 189 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 SMIM6P0DI80 62 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 ZNF788Q6ZQV5 615 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 SLC16A13Q7RTY0 426 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 ABHD12Q8N2K0 398 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 FAM216BQ8N7L0 139 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 OR4S2Q8NH73 311 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 HEYLQ9NQ87 328 aaPredicted RBP14.46□□□□□ -0.09
USH1C-205ENST00000527020 MANBALQ9NQG1 85 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 NAT8Q9UHE5 227 aa14.46□□□□□ -0.09
USH1C-205ENST00000527020 DMXL2Q8TDJ6 3036 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 TRGV10A0A0A0MS01 117 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 SEC14L6B5MCN3 397 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 CLN5O75503 358 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 MMP23AO75900 390 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 GYPAP02724 150 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 SELENOVP59797 346 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 NCMAPQ5T1S8 102 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 TREML4Q6UXN2 200 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 ZNF383Q8NA42 475 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.46□□□□□ -0.1
USH1C-205ENST00000527020 NUP37Q8NFH4 326 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 TCF19Q9Y242 345 aa14.46□□□□□ -0.1
USH1C-205ENST00000527020 A0A0G2JNJ9 132 aa14.45□□□□□ -0.1
USH1C-205ENST00000527020 CDC34P49427 236 aaPredicted RBP14.45□□□□□ -0.1
USH1C-205ENST00000527020 TMPRSS3P57727 454 aa14.45□□□□□ -0.1
USH1C-205ENST00000527020 ACOT6Q3I5F7 207 aaPredicted RBP14.45□□□□□ -0.1
USH1C-205ENST00000527020 RPUSD4Q96CM3 377 aaKnown RBP14.45□□□□□ -0.1
USH1C-205ENST00000527020 SNRNP40Q96DI7 357 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms