RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 ST8SIA3O43173 380 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 RBFOX2O43251 390 aaKnown RBP eCLIP6.51□□□□□ -1.37
FDPS-218ENST00000492887 SSSCA1O60232 199 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 TSC22D2O75157 780 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 PROP1O75360 226 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 MED6O75586 246 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 MPC2O95563 127 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 IFNA17P01571 189 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 IGKV1-39P01597 117 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 IGKV1-5P01602 117 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 IGKV1D-39P04432 117 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 IGHV4-31P0DP07 118 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 HLA-GP17693 338 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 PAX6P26367 422 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 PSMB6P28072 239 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 SAA4P35542 130 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 HOXA1P49639 335 aaPredicted RBP6.51□□□□□ -1.37
FDPS-218ENST00000492887 ZNF137PP52743 207 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 AP2S1P53680 142 aaPredicted RBP6.51□□□□□ -1.37
FDPS-218ENST00000492887 PAX8Q06710 450 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 NMSQ5H8A3 153 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 C11orf87Q6NUJ2 197 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 BRD3OSQ6XYD6 125 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 VKORC1L1Q8N0U8 176 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 OR4C13Q8NGP0 309 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 OSR1Q8TAX0 266 aaPredicted RBP6.51□□□□□ -1.37
FDPS-218ENST00000492887 DDB2Q92466 427 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 HINT2Q9BX68 163 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 MS4A7Q9GZW8 240 aaPredicted RBP6.51□□□□□ -1.37
FDPS-218ENST00000492887 MAGT1Q9H0U3 335 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 UNKLQ9H9P5 680 aaKnown RBP6.51□□□□□ -1.37
FDPS-218ENST00000492887 ENY2Q9NPA8 101 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 KIAA1456Q9P272 454 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 NSG2Q9Y328 171 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 FAM96BQ9Y3D0 163 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 CRYBG3Q68DQ2 2970 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 TNCP24821 2201 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 ABCA1O95477 2261 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 IGHV1-69DA0A0B4J2H0 117 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 CENPVL3A0A0U1RRI6 287 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 A0A1B0GU03 582 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 A0A1W2PPI3 338 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 J3QLI3 93 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 K7EPK0 472 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 OR2A4O95047 310 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 IGKV1D-33P01593 117 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 IGKV1-33P01594 117 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 IGHV1-69P01742 117 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 SNRNP70P08621 437 aaKnown RBP6.5□□□□□ -1.37
FDPS-218ENST00000492887 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 SAA1P0DJI8 122 aaPredicted RBP6.5□□□□□ -1.37
FDPS-218ENST00000492887 IAPPP10997 89 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 TMEM11P17152 192 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 BRS3P32247 399 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 POLR2GP62487 172 aaKnown RBP eCLIP6.5□□□□□ -1.37
FDPS-218ENST00000492887 MIDNQ504T8 468 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 SPINK9Q5DT21 86 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 OR4A47Q6IF82 309 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 KRTAP1-3Q8IUG1 177 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 FAM71E2Q8N5Q1 922 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 INO80EQ8NBZ0 244 aaPredicted RBP6.5□□□□□ -1.37
FDPS-218ENST00000492887 OR4D5Q8NGN0 318 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 VSTM2AQ8TAG5 236 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 ST6GALNAC6Q969X2 333 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 RBMXL1Q96E39 390 aaKnown RBP6.5□□□□□ -1.37
FDPS-218ENST00000492887 RHOVQ96L33 236 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 OR2A7Q96R45 310 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 TSNAXQ99598 290 aaKnown RBP6.5□□□□□ -1.37
FDPS-218ENST00000492887 HSPB11Q9Y547 144 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 POMT1Q9Y6A1 747 aa6.5□□□□□ -1.37
FDPS-218ENST00000492887 USP9YO00507 2555 aaPredicted RBP6.5□□□□□ -1.37
FDPS-218ENST00000492887 UTP20O75691 2785 aaKnown RBP6.49□□□□□ -1.37
FDPS-218ENST00000492887 A0A096LNT2 108 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 TRAV14DV4A0A0A6YYC5 116 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 KANTRA0A1W2PQU2 76 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 OOSP1A8MZH6 123 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 E5RGE8 158 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 SLC25A17O43808 307 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 ACTL6BO94805 426 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 OR2F2O95006 317 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 MBPP02686 304 aaPredicted RBP6.49□□□□□ -1.37
FDPS-218ENST00000492887 IGKV1-16P04430 117 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 SLC25A6P12236 298 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 C4BPBP20851 252 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 CD24P25063 80 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 RPL23AP62750 156 aaKnown RBP6.49□□□□□ -1.37
FDPS-218ENST00000492887 GNB1P62873 340 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 SRSF4Q08170 494 aaKnown RBP6.49□□□□□ -1.37
FDPS-218ENST00000492887 HNF4GQ14541 408 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 MMDQ15546 238 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 Q5BKY6 102 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 PRSS54Q6PEW0 395 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 ZNF546Q86UE3 836 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 OR5AN1Q8NGI8 311 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 OR2T10Q8NGZ9 312 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 ABHD5Q8WTS1 349 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 MALSU1Q96EH3 234 aa6.49□□□□□ -1.37
FDPS-218ENST00000492887 QTRT1Q9BXR0 403 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms