RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CTXND1A0A1B0GTU2 59 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 C10orf142B7Z368 130 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 LIPFP07098 398 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 HTR1DP28221 377 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 BAGE3Q86Y29 109 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 BAGE2Q86Y30 109 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 DENND4AQ7Z401 1863 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 NCOR2Q9Y618 2525 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 LYZP61626 148 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 SLC35E3Q7Z769 313 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 TMEM186Q96B77 213 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 WFIKKN1Q96NZ8 548 aa12.18□□□□□ -0.46
TCOF1-202ENST00000377797 DVL1O14640 695 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 CFPP27918 469 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.46
TCOF1-202ENST00000377797 IGHV3-21A0A0B4J1V1 117 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 TM4SF5O14894 197 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 RD3LP0DJH9 198 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 UBE2L3P68036 154 aaKnown RBP12.17□□□□□ -0.46
TCOF1-202ENST00000377797 TUBD1Q9UJT1 453 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 NAPSAO96009 420 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 PRR30Q53SZ7 412 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-202ENST00000377797 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-202ENST00000377797 OR4C13Q8NGP0 309 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 TECRQ9NZ01 308 aaKnown RBP12.17□□□□□ -0.46
TCOF1-202ENST00000377797 LOC105371242A0A075B767 164 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 KBTBD11O94819 623 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 CCL3L1P16619 93 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 C21orf62-AS1Q17RA5 79 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 C5orf24Q7Z6I8 188 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 MMD2Q8IY49 270 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 HIF1ANQ9NWT6 349 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 VAX2Q9UIW0 290 aa12.17□□□□□ -0.46
TCOF1-202ENST00000377797 ZNF503-AS2A6NEH8 195 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 GNG7O60262 68 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 CLEC3BP05452 202 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 SMIM8Q96KF7 97 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 SEC11CQ9BY50 192 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 ZNF331Q9NQX6 463 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-202ENST00000377797 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 SELLP14151 372 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 PSG5Q15238 335 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 PNKDQ8N490 385 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 SH3BGRL3Q9H299 93 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 LYNX1G3V0Z9 82 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 PAGE4O60829 102 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 LYNX1P0DP58 116 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 COX6B1P14854 86 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 HCP5Q6MZN7 132 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 C1orf147Q96MC9 270 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-202ENST00000377797 METTL1Q9UBP6 276 aaKnown RBP12.16□□□□□ -0.46
TCOF1-202ENST00000377797 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 IGSF23A1L1A6 192 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 C11orf94C9JXX5 98 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 MLNRO43193 412 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 LGALS7P47929 136 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 ATP5J2P56134 94 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 RNF212Q495C1 297 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 FAM24BQ8N5W8 94 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 PTPRQQ9UMZ3 2332 aa12.16□□□□□ -0.46
TCOF1-202ENST00000377797 CLDN34H7C241 214 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 SUPT4H1P63272 117 aaKnown RBP12.15□□□□□ -0.46
TCOF1-202ENST00000377797 SCGB2A2Q13296 93 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 C4orf17Q53FE4 359 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 AWAT1Q58HT5 328 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 OR4X1Q8NH49 305 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 RNF126Q9BV68 326 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 H0YIZ8 118 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 MEF2CQ06413 473 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-202ENST00000377797 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 LINC00312Q9Y6C7 94 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 NHLH1Q02575 133 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 UNQ6494/PRO21346Q6UXR6 183 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 OR4F17Q8NGA8 305 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 ABCA1O95477 2261 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 USF1P22415 310 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-202ENST00000377797 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 BIVMQ86UB2 503 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 QTRT1Q9BXR0 403 aaKnown RBP12.15□□□□□ -0.46
TCOF1-202ENST00000377797 TMEM167BQ9NRX6 74 aa12.15□□□□□ -0.46
TCOF1-202ENST00000377797 SLC25A5P05141 298 aaKnown RBP12.14□□□□□ -0.47
TCOF1-202ENST00000377797 FHITP49789 147 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 ZNF324BQ6AW86 544 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-202ENST00000377797 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 PXMP4Q9Y6I8 212 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 NCOA6Q14686 2063 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-202ENST00000377797 OR10J1P30954 320 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 IGF2RP11717 2491 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 MPDU1O75352 247 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 GINS3Q9BRX5 216 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 TLNRD1Q9H1K6 362 aa12.14□□□□□ -0.47
TCOF1-202ENST00000377797 TNFRSF19Q9NS68 423 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms