RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SPINK4O60575 86 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 GYPAP02724 150 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 NDUFB7P17568 137 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 SLC35E4Q6ICL7 350 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 DUX4L9Q6RFH8 374 aaPredicted RBP10.78□□□□□ -0.68
USP11-204ENST00000377107 TMEM14EPQ6UXP3 125 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 BHLHA15Q7RTS1 189 aaPredicted RBP10.78□□□□□ -0.68
USP11-204ENST00000377107 KDF1Q8NAX2 398 aaPredicted RBP10.78□□□□□ -0.68
USP11-204ENST00000377107 OR10A7Q8NGE5 316 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 ITLN1Q8WWA0 313 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 RND1Q92730 232 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
USP11-204ENST00000377107 SPTBN1Q01082 2364 aaKnown RBP10.77□□□□□ -0.68
USP11-204ENST00000377107 RRHO14718 337 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 LMO1P25800 156 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 THBS3P49746 956 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 PNRC1Q12796 327 aaPredicted RBP10.77□□□□□ -0.69
USP11-204ENST00000377107 ACOT6Q3I5F7 207 aaPredicted RBP10.77□□□□□ -0.69
USP11-204ENST00000377107 MBD3L1Q8WWY6 194 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.69
USP11-204ENST00000377107 GCM1Q9NP62 436 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 XKRY2A2RUG3 117 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 IFITM10A6NMD0 228 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 AQP7O14520 342 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 GAMTQ14353 236 aa10.77□□□□□ -0.69
USP11-204ENST00000377107 CIB3Q96Q77 187 aaPredicted RBP10.77□□□□□ -0.69
USP11-204ENST00000377107 ZNF320A2RRD8 509 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 SEC14L6B5MCN3 397 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 SLC31A2O15432 143 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 RPL23P62829 140 aaKnown RBP10.76□□□□□ -0.69
USP11-204ENST00000377107 S100A12P80511 92 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 DEFA6Q01524 100 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 PPP1R35Q8TAP8 253 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 EDARADDQ8WWZ3 215 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 CLCF1Q9UBD9 225 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 TP53TG5Q9Y2B4 290 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 A0A087WWC5 75 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 NEIL1Q96FI4 390 aaPredicted RBP10.76□□□□□ -0.69
USP11-204ENST00000377107 CCL8P80075 99 aa10.76□□□□□ -0.69
USP11-204ENST00000377107 USF2Q15853 346 aaPredicted RBP10.76□□□□□ -0.69
USP11-204ENST00000377107 SEBOXQ9HB31 216 aaPredicted RBP10.76□□□□□ -0.69
USP11-204ENST00000377107 ANKRD11Q6UB99 2663 aaPredicted RBP10.76□□□□□ -0.69
USP11-204ENST00000377107 B4DEV8 164 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 IGHV3-48P01763 117 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 REG1BP48304 166 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 P2RY6Q15077 328 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 OR4X1Q8NH49 305 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 SNRNP40Q96DI7 357 aaKnown RBP10.75□□□□□ -0.69
USP11-204ENST00000377107 CCL13Q99616 98 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 HSD17B10Q99714 261 aaKnown RBP10.75□□□□□ -0.69
USP11-204ENST00000377107 COL6A6A6NMZ7 2263 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 PLXNB1O43157 2135 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 PPIHO43447 177 aaKnown RBP10.75□□□□□ -0.69
USP11-204ENST00000377107 KBTBD11O94819 623 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 PRSS8Q16651 343 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 MRPL41Q8IXM3 137 aaKnown RBP10.75□□□□□ -0.69
USP11-204ENST00000377107 MALSU1Q96EH3 234 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 TRAV1-1A0A0B4J248 108 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 PRR33A8MZF0 331 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 NPIPB11E5RHQ5 1161 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 MBP02144 154 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 LRFN3Q9BTN0 628 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 OR6C3Q9NZP0 311 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 ADGRG4Q8IZF6 3080 aa10.75□□□□□ -0.69
USP11-204ENST00000377107 IGKV1D-17A0A075B6S4 117 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 RAB29O14966 203 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 ARL14EPLP0DKL9 152 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 SELENOVP59797 346 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 MSMPQ1L6U9 139 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 ZBTB34Q8NCN2 500 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 DCAF16Q9NXF7 216 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 CACNA1BQ00975 2339 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 FAM90A26D6RGX4 464 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 DVL1O14640 695 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 C1QTNF9P0C862 333 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 GATA2P23769 480 aaPredicted RBP10.74□□□□□ -0.69
USP11-204ENST00000377107 ZNF134P52741 427 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 KLF3P57682 345 aaPredicted RBP10.74□□□□□ -0.69
USP11-204ENST00000377107 FAM27E3Q08E93 113 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 ACSF3Q4G176 576 aaPredicted RBP10.74□□□□□ -0.69
USP11-204ENST00000377107 TGIF2LYQ8IUE0 185 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 ZADH2Q8N4Q0 377 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 MS4A5Q9H3V2 200 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 DUTP33316 252 aaKnown RBP10.74□□□□□ -0.69
USP11-204ENST00000377107 ATP6V1FQ16864 119 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 PLA2G2CQ5R387 149 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 HIST3H2BBQ8N257 126 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 OR2T10Q8NGZ9 312 aa10.74□□□□□ -0.69
USP11-204ENST00000377107 TLN1Q9Y490 2541 aaKnown RBP10.73□□□□□ -0.69
USP11-204ENST00000377107 IGKV3-15P01624 115 aa10.73□□□□□ -0.69
USP11-204ENST00000377107 GZMHP20718 246 aa10.73□□□□□ -0.69
USP11-204ENST00000377107 PRB3Q04118 309 aaPredicted RBP10.73□□□□□ -0.69
USP11-204ENST00000377107 MORN2Q502X0 79 aa10.73□□□□□ -0.69
USP11-204ENST00000377107 WFDC8Q8IUA0 241 aa10.73□□□□□ -0.69
USP11-204ENST00000377107 H1FXQ92522 213 aaKnown RBP10.73□□□□□ -0.69
USP11-204ENST00000377107 STARD4Q96DR4 205 aa10.73□□□□□ -0.69
USP11-204ENST00000377107 PXMP4Q9Y6I8 212 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms