RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 HOXA4Q00056 320 aaPredicted RBP13.77□□□□□ -0.2
TRIM39-201ENST00000376656 VASH2Q86V25 355 aa13.77□□□□□ -0.2
TRIM39-201ENST00000376656 FAM103A1Q9BTL3 118 aaKnown RBP13.77□□□□□ -0.2
TRIM39-201ENST00000376656 KCNIP1Q9NZI2 227 aa13.77□□□□□ -0.2
TRIM39-201ENST00000376656 YTHDF2Q9Y5A9 579 aaKnown RBP13.77□□□□□ -0.2
TRIM39-201ENST00000376656 LINC00473A8K010 186 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 IER3P46695 156 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 IFI44Q8TCB0 444 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 FCN1O00602 326 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 SH2D1BO14796 132 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 RTL8AQ9BWD3 113 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 PPIAL4AQ9Y536 164 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 FAM186AA6NE01 2351 aa13.77□□□□□ -0.21
TRIM39-201ENST00000376656 MIC13Q5XKP0 118 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 SPINK14Q6IE38 97 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 LRFN3Q9BTN0 628 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-201ENST00000376656 AQP7O14520 342 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 HBZP02008 142 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 STAG3L2P0CL84 134 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 STAG3L3P0CL85 134 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 PPP1R32Q7Z5V6 425 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 OR2M7Q8NG81 312 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 APH1AQ96BI3 265 aa13.76□□□□□ -0.21
TRIM39-201ENST00000376656 IGHEP01854 428 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 OR9G9P0C7N8 305 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 KRTDAPP60985 99 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 ZNF146Q15072 292 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 KMT2EQ8IZD2 1858 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 Q8N976 141 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 SNURFLB1AK76 121 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 TFF1P04155 84 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 LGALS4P56470 323 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 AESQ08117 197 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 TREML4Q6UXN2 200 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 MGST2Q99735 147 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 HAND1O96004 215 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 CYB561P49447 251 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 RAB7AP51149 207 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 CLDN18P56856 261 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 RPL31P62899 125 aaKnown RBP13.75□□□□□ -0.21
TRIM39-201ENST00000376656 Q8IYB0 196 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 DNAJC13O75165 2243 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 DOCK10Q96BY6 2186 aa13.75□□□□□ -0.21
TRIM39-201ENST00000376656 IGHV3-43A0A0B4J1X8 118 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 TMEM30CPA0ZSE6 113 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 SIAH2O43255 324 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 CXorf1O96002 111 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 IGHV3-43DP0DP04 118 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 PCP4P48539 62 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 MMDQ15546 238 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 ALKBH6Q3KRA9 238 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 ZNF718Q3SXZ3 478 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 COL5A1-AS1Q5SY13 56 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 POLDIP2Q9Y2S7 368 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 GRPP07492 148 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 OPRK1P41145 380 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 Q0VG73 95 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 C11orf42Q8N5U0 333 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 TAAR6Q96RI8 345 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 GNB4Q9HAV0 340 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 TCF21O43680 179 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 PDLIM3Q53GG5 364 aaPredicted RBP13.74□□□□□ -0.21
TRIM39-201ENST00000376656 SIGLECL1Q8N7X8 197 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 MRGPRDQ8TDS7 321 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 TXNDC17Q9BRA2 123 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 GGTLC1Q9BX51 225 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 MS4A5Q9H3V2 200 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 CHODLQ9H9P2 273 aa13.74□□□□□ -0.21
TRIM39-201ENST00000376656 DEFB108AA8MXU0 73 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 TGFBR3Q03167 851 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 SPATA31B1PQ5VZV4 182 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 NINJ1Q92982 152 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 MRPS17Q9Y2R5 130 aaKnown RBP13.73□□□□□ -0.21
TRIM39-201ENST00000376656 DIRC3C9JPN6 131 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 SPINK4O60575 86 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 GPX1P07203 203 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 CHRNB4P30926 498 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 C3AR1Q16581 482 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 ST6GALNAC3Q8NDV1 305 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 SSMEM1Q8WWF3 244 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 GP6Q9HCN6 339 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 DNAJC4Q9NNZ3 241 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 ZFP30Q9Y2G7 519 aa13.73□□□□□ -0.21
TRIM39-201ENST00000376656 TRAV9-1A0A075B6T8 112 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 WNT9BO14905 357 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 MDP1Q86V88 176 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 MMD2Q8IY49 270 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 SPEM1Q8N4L4 309 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 TPRX1Q8N7U7 411 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 HES7Q9BYE0 225 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 WISP2O76076 250 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 TRA2AQ13595 282 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRIM39-201ENST00000376656 GMPPAQ96IJ6 420 aaPredicted RBP13.72□□□□□ -0.21
TRIM39-201ENST00000376656 C12orf49Q9H741 205 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 TBL2Q9Y4P3 447 aaKnown RBP13.72□□□□□ -0.21
TRIM39-201ENST00000376656 HCFC1P51610 2035 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 FAM166BA8MTA8 275 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 GCHFRP30047 84 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms