RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
SRPK1-204ENST00000373825 NHP2Q9NX24 153 aaKnown RBP13.15□□□□□ -0.3
SRPK1-204ENST00000373825 PDCD11Q14690 1871 aaKnown RBP13.15□□□□□ -0.3
SRPK1-204ENST00000373825 TIMM8AO60220 97 aaPredicted RBP13.15□□□□□ -0.31
SRPK1-204ENST00000373825 NUPR1O60356 82 aa13.15□□□□□ -0.31
SRPK1-204ENST00000373825 MESP2Q0VG99 397 aa13.15□□□□□ -0.31
SRPK1-204ENST00000373825 ST20Q9HBF5 79 aa13.15□□□□□ -0.31
SRPK1-204ENST00000373825 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.31
SRPK1-204ENST00000373825 CGAP01215 116 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 STAG3L2P0CL84 134 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 CCR5P51681 352 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 TGFAP01135 160 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 LIPFP07098 398 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 GNG3P63215 75 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 FAM169BQ8N8A8 192 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 MRPS16Q9Y3D3 137 aaKnown RBP13.14□□□□□ -0.31
SRPK1-204ENST00000373825 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 H7C2G1 150 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 ERHP84090 104 aaKnown RBP13.14□□□□□ -0.31
SRPK1-204ENST00000373825 ID3Q02535 119 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
SRPK1-204ENST00000373825 ZC2HC1AQ96GY0 325 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 HES4Q9HCC6 221 aa13.14□□□□□ -0.31
SRPK1-204ENST00000373825 A8MWL6 223 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 UCP1P25874 307 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 GCHFRP30047 84 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 ZNF83P51522 516 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 DEFB108BQ8NET1 73 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 DEPPQ9NTK1 212 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 OPRK1P41145 380 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 MS4A18H0YCH9 400 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 AZU1P20160 251 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 TIMP3P35625 211 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 RBX1P62877 108 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 MS4A18Q3C1V0 323 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 PDPNQ86YL7 162 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 POM121L2Q96KW2 1035 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 NPVFQ9HCQ7 196 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 B4GALT7Q9UBV7 327 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 CACNA1GO43497 2377 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
SRPK1-204ENST00000373825 K7EP13 123 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 DRD3P35462 400 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 SELENOVP59797 346 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 GNB1P62873 340 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 TNXAQ16473 311 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 UBTD1Q9HAC8 227 aa13.13□□□□□ -0.31
SRPK1-204ENST00000373825 TRAV8-6A0A0B4J262 113 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 IGKV1D-13A0A0B4J2D9 117 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 IGKV1-9A0A0C4DH69 117 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 A0A1B0GX78 115 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 TMEM30CPA0ZSE6 113 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 CTSBP07858 339 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 IGKV1-13P0DP09 117 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 OR1D5P58170 312 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 FOXL1Q12952 345 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 GEMIN7Q9H840 131 aaKnown RBP13.12□□□□□ -0.31
SRPK1-204ENST00000373825 LINC00696Q6ZRV3 163 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 SHISA5Q8N114 240 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 ABHD12Q8N2K0 398 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 UCN2Q96RP3 112 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 LRRC61Q9BV99 259 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 SEPSECSQ9HD40 501 aaKnown RBP13.12□□□□□ -0.31
SRPK1-204ENST00000373825 SCRG1O75711 98 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 TSSC4Q9Y5U2 329 aaPredicted RBP13.12□□□□□ -0.31
SRPK1-204ENST00000373825 SPTBN2O15020 2390 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 YPEL5P62699 121 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 ATP23Q9Y6H3 246 aa13.12□□□□□ -0.31
SRPK1-204ENST00000373825 SP1P08047 785 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 C5orf17Q8NAS9 161 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 FAM131CQ96AQ9 280 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 LYRM7Q5U5X0 104 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 SLC23A3Q6PIS1 610 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 OR2M7Q8NG81 312 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 SRSF8Q9BRL6 282 aaKnown RBP13.11□□□□□ -0.31
SRPK1-204ENST00000373825 EMP1P54849 157 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 TEX43Q6ZNM6 134 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 OR5A1Q8NGJ0 315 aa13.11□□□□□ -0.31
SRPK1-204ENST00000373825 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
SRPK1-204ENST00000373825 POLEQ07864 2286 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 DOPEY2Q9Y3R5 2298 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 IGHV2-70DA0A0C4DH43 119 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 F2Z2F3 143 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 LINC00114Q6XXX2 140 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 KBTBD11-OT1A0A1B0GTJ5 212 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 FAM181BA6NEQ2 426 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 H3BTX0 84 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 PLAURQ03405 335 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 ATP6V0BQ99437 205 aa13.1□□□□□ -0.31
SRPK1-204ENST00000373825 TSPAN2O60636 221 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms