RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 A8MXE2 369 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 RBFOX2O43251 390 aaKnown RBP eCLIP16.34■□□□□ 0.21
LRFN4-201ENST00000309602 FAM209BQ5JX69 171 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 OR4A16Q8NH70 328 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 RNF7Q9UBF6 113 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 TRAV3A0A0B4J244 114 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 CYB5R3P00387 301 aaPredicted RBP16.34■□□□□ 0.21
LRFN4-201ENST00000309602 DEFA4P12838 97 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 TNFAIP6P98066 277 aaPredicted RBP16.34■□□□□ 0.21
LRFN4-201ENST00000309602 WDR25Q64LD2 544 aaPredicted RBP16.34■□□□□ 0.21
LRFN4-201ENST00000309602 ZNF600Q6ZNG1 722 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 Q8N7P7 452 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 ZNF709Q8N972 641 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 S1PR3Q99500 378 aa16.34■□□□□ 0.21
LRFN4-201ENST00000309602 CD40P25942 277 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 SPCS3P61009 180 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 MEF2BQ02080 365 aaPredicted RBP16.33■□□□□ 0.2
LRFN4-201ENST00000309602 DEFB108BQ8NET1 73 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 GATAD1Q8WUU5 269 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 DDB2Q92466 427 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 RAB24Q969Q5 203 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 ACTR3CQ9C0K3 210 aaPredicted RBP16.33■□□□□ 0.2
LRFN4-201ENST00000309602 GFOD1Q9NXC2 390 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 RP1L1Q8IWN7 2480 aaPredicted RBP16.33■□□□□ 0.2
LRFN4-201ENST00000309602 AP4M1O00189 453 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 CCKARP32238 428 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 ERVK-16P61578 105 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 RELBQ01201 579 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 CT45A1Q5HYN5 189 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 STUMQ69YW2 141 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 CT45A3Q8NHU0 189 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 SDSLQ96GA7 329 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 NCOR1P1Q9H4R4 102 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 PLCE1Q9P212 2302 aa16.33■□□□□ 0.2
LRFN4-201ENST00000309602 SELENOVP59797 346 aa16.32■□□□□ 0.2
LRFN4-201ENST00000309602 KRTCAP3Q53RY4 240 aa16.32■□□□□ 0.2
LRFN4-201ENST00000309602 TMEM140Q9NV12 185 aa16.32■□□□□ 0.2
LRFN4-201ENST00000309602 IL19Q9UHD0 177 aa16.32■□□□□ 0.2
LRFN4-201ENST00000309602 WDR83OSQ9Y284 106 aa16.32■□□□□ 0.2
LRFN4-201ENST00000309602 KBTBD11-OT1A0A1B0GTJ5 212 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 VDAC2P45880 294 aaPredicted RBP16.31■□□□□ 0.2
LRFN4-201ENST00000309602 ZNF674Q2M3X9 581 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 TCF23Q7RTU1 214 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 TGIF2LYQ8IUE0 185 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 GAFA1Q96PS6 74 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 C17orf112F2Z3M2 114 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 IFNA10P01566 189 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 CD1BP29016 333 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 PSMB3P49720 205 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 RAB7AP51149 207 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 KIAA0141Q14154 515 aaPredicted RBP16.31■□□□□ 0.2
LRFN4-201ENST00000309602 OR52E5Q8NH55 327 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 DSCAML1Q8TD84 2053 aa16.31■□□□□ 0.2
LRFN4-201ENST00000309602 SAA2-SAA4A0A096LPE2 208 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 ITGB1BP1O14713 200 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 RRHO14718 337 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 S100A8P05109 93 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 SAA2P0DJI9 122 aaPredicted RBP16.3■□□□□ 0.2
LRFN4-201ENST00000309602 KIR2DS2P43631 304 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 CCL13Q99616 98 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 SMIM7Q9BQ49 75 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 HEYLQ9NQ87 328 aaPredicted RBP16.3■□□□□ 0.2
LRFN4-201ENST00000309602 DCAF16Q9NXF7 216 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 GAB2Q9UQC2 676 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 TET2Q6N021 2002 aaPredicted RBP16.3■□□□□ 0.2
LRFN4-201ENST00000309602 CYB5BO43169 146 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 FOSL1P15407 271 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 SSX3Q99909 188 aa16.3■□□□□ 0.2
LRFN4-201ENST00000309602 RAI1Q7Z5J4 1906 aaPredicted RBP16.3■□□□□ 0.2
LRFN4-201ENST00000309602 TRGV10A0A0A0MS01 117 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 LINC00587B1AMM8 73 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 GYPAP02724 150 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 RND2P52198 227 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 PDLIM3Q53GG5 364 aaPredicted RBP16.29■□□□□ 0.2
LRFN4-201ENST00000309602 GCSAMLQ5JQS6 135 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 FAM216BQ8N7L0 139 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 OR4S2Q8NH73 311 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 ZNF251Q9BRH9 671 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 TMEM242Q9NWH2 141 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 CLDN34H7C241 214 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 GFRA3O60609 400 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 LY86O95711 162 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 SLC16A13Q7RTY0 426 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 TMEM170AQ8WVE7 144 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 RPUSD4Q96CM3 377 aaKnown RBP16.29■□□□□ 0.2
LRFN4-201ENST00000309602 NAT8Q9UHE5 227 aa16.29■□□□□ 0.2
LRFN4-201ENST00000309602 SMCO3A2RU48 225 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 ACOT6Q3I5F7 207 aaPredicted RBP16.28■□□□□ 0.2
LRFN4-201ENST00000309602 NCMAPQ5T1S8 102 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 CYP2G1PQ6ZSU1 146 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 ABHD12Q8N2K0 398 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 DIRC2Q96SL1 478 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 MANBALQ9NQG1 85 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 TCF19Q9Y242 345 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 TANC2Q9HCD6 1990 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 PRSS46E5RG02 174 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 KBTBD11O94819 623 aa16.28■□□□□ 0.2
LRFN4-201ENST00000309602 CDC34P49427 236 aaPredicted RBP16.28■□□□□ 0.2
LRFN4-201ENST00000309602 RPP30P78346 268 aaKnown RBP16.28■□□□□ 0.2
LRFN4-201ENST00000309602 ZNF788Q6ZQV5 615 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms