RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 MGST1P10620 155 aaKnown RBP12.29□□□□□ -0.44
COL6A2-201ENST00000300527 LHX2P50458 406 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 CATR1Q13166 79 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 ACSF3Q4G176 576 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-201ENST00000300527 SPATA31B1PQ5VZV4 182 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 SPINK14Q6IE38 97 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 UNQ5815/PRO19632Q6UWF5 114 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 DOLPP1Q86YN1 238 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 PRDM6Q9NQX0 595 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 RNF24Q9Y225 148 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 PRR14LQ5THK1 2151 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 A8MXE2 369 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 TOX3O15405 576 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-201ENST00000300527 IL6RP08887 468 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-201ENST00000300527 EDDM3AQ14507 147 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 MAJINQ3KP22 176 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 LCN12Q6JVE5 192 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 TEX43Q6ZNM6 134 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 APH1AQ96BI3 265 aa12.29□□□□□ -0.44
COL6A2-201ENST00000300527 PINLYPA6NC86 204 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 RRHO14718 337 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 WNT9BO14905 357 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
COL6A2-201ENST00000300527 ABHD12Q8N2K0 398 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 GALMQ96C23 342 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 COL5A1P20908 1838 aaPredicted RBP12.28□□□□□ -0.44
COL6A2-201ENST00000300527 LINC00614P0C842 121 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 UBE2NP61088 152 aaKnown RBP12.28□□□□□ -0.44
COL6A2-201ENST00000300527 FOXL1Q12952 345 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 PRAMEF5Q5TYX0 476 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 PRAMEF6Q5VXH4 476 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 SAXO1Q8IYX7 474 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 RNASE8Q8TDE3 154 aaKnown RBP12.28□□□□□ -0.44
COL6A2-201ENST00000300527 KCNIP2Q9NS61 270 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 YTHDF2Q9Y5A9 579 aaKnown RBP12.28□□□□□ -0.44
COL6A2-201ENST00000300527 FCGR3BO75015 233 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 MT-CO3P00414 261 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 MMD2Q8IY49 270 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 IMMP1LQ96LU5 166 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 NRN1Q9NPD7 142 aa12.28□□□□□ -0.44
COL6A2-201ENST00000300527 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.44
COL6A2-201ENST00000300527 Q8NFD4 153 aa12.27□□□□□ -0.44
COL6A2-201ENST00000300527 DCTN5Q9BTE1 182 aa12.27□□□□□ -0.44
COL6A2-201ENST00000300527 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.44
COL6A2-201ENST00000300527 MAP1BP46821 2468 aaKnown RBP12.27□□□□□ -0.44
COL6A2-201ENST00000300527 FOXH1O75593 365 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 NEURL1O76050 574 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 SSTR5P35346 364 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 ALKBH6Q3KRA9 238 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 RIPPLY2Q5TAB7 128 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 NHLRC2Q8NBF2 726 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 SMRP1Q8NCR6 262 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 OR4P4Q8NGL7 312 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 KCNE4Q8WWG9 221 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 PI4KAP42356 2102 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 LOC102724200A0A096LPH7 203 aaPredicted RBP12.27□□□□□ -0.45
COL6A2-201ENST00000300527 SRIP30626 198 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 PSG7Q13046 419 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 RPEL1Q2QD12 228 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 KRTAP27-1Q3LI81 207 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 TRIM61Q5EBN2 209 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 HES7Q9BYE0 225 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 STRADBQ9C0K7 418 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 ZFP30Q9Y2G7 519 aa12.27□□□□□ -0.45
COL6A2-201ENST00000300527 TIMM8BQ9Y5J9 83 aaPredicted RBP12.27□□□□□ -0.45
COL6A2-201ENST00000300527 C12orf77C9JDV5 145 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 FAM90A26D6RGX4 464 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 Q6P435 159 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 COLCA1Q6ZS62 124 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 SCCPDHQ8NBX0 429 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 AGBL5Q8NDL9 886 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 C5orf30Q96GV9 206 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 ZNF703Q9H7S9 590 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-201ENST00000300527 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 ICE1Q9Y2F5 2266 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 PMS2P5A8MQ11 134 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-201ENST00000300527 J3QT63 122 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 K7EN84 100 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 PSPNO60542 156 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 CA1P00915 261 aaPredicted RBP12.26□□□□□ -0.45
COL6A2-201ENST00000300527 HBZP02008 142 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 FOLR3P41439 243 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 GAGE1Q13065 139 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 ST6GALNAC6Q969X2 333 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 MS4A5Q9H3V2 200 aa12.26□□□□□ -0.45
COL6A2-201ENST00000300527 CFIP05156 583 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 ZNF645Q8N7E2 425 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 ASCL3Q9NQ33 180 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 C15orf62A8K5M9 175 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 ZNF497Q6ZNH5 498 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 OR4A16Q8NH70 328 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 OBP2BQ9NPH6 170 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 LAMTOR2Q9Y2Q5 125 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 LINC00473A8K010 186 aa12.25□□□□□ -0.45
COL6A2-201ENST00000300527 YPEL1O60688 119 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms