RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 4930467E23RikD3Z1P8 350 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gm15319E9Q637 350 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Mex3aG3UYU0 520 aaKnown RBP12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Mdh2P08249 338 aaKnown RBP12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Rnft2Q3UF64 445 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gm11232Q5SPI8 295 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gp49aQ61450 303 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Spin2cQ6NVE3 257 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Q8BTC1 67 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gm21119Q8C646 350 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Eva1aQ91WM6 156 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 OcstampQ9D611 498 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Tex37Q9DAG4 180 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Syt7Q9R0N7 403 aa12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 SncgQ9Z0F7 123 aaKnown RBP12.53□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gm20815J3KMI0 227 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gm20914J3QME2 227 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gm21788J3QNH3 180 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Mcpt9O35164 246 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 SrcP05480 541 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Adra2cQ01337 458 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Ascl1Q02067 231 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Tfap2eQ6VUP9 442 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Gm21292Q78EE2 227 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Lmf2Q8C3X8 702 aaKnown RBP12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Olfr195Q8VGQ6 308 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Med28Q920D3 178 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Map1aQ9QYR6 2776 aa12.52□□□□□ -0.4
Nup88-202ENSMUST00000108530 Trbv15A0A0A6YYE3 115 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 C2cd6E9Q152 557 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Vmn1r129E9QA94 307 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ear14F6YUX7 155 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm8720K9J7F4 307 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Rnase2O35291 155 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 P01660 111 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 P01798 113 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Hoxb5P09079 269 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 SellP18337 372 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Pcgf2P23798 342 aaKnown RBP12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Kat7Q5SVQ0 613 aaKnown RBP12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm10277Q6R5C6 214 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cmc2Q8K199 79 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Slc35e4Q8K3D6 351 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1241Q8VF91 314 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 SvbpQ99LQ4 66 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ccdc54Q9DAL3 329 aa12.52□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm7697A0A0J9YUH2 350 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm9495A0A0J9YUZ3 350 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 RnlsA7RDN6 342 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tcrg-V1P06325 135 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Asgr2P24721 301 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Spatc1Q148B6 480 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Slc2a9Q3T9X0 538 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 1700057G04RikQ3V0U0 232 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Taar9Q5QD04 348 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr91Q7TRL3 312 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Kiaa1456Q80WQ4 447 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr50Q8VGK5 312 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Poldip2Q91VA6 368 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Bin3Q9JI08 253 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Xcr1Q9R0M1 322 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Trbv23A0A0A6YWQ1 115 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 A0A1L1SV24 88 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1337A2ACY8 315 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Rhox3gB9EJQ9 160 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm4950D3YUM8 205 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cdc20bD3Z3I0 519 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Zfp976E9Q981 636 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 AhsgP29699 345 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 AtcayQ8BHE3 372 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Serpinb1bQ8VHP7 382 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Sema7aQ9QUR8 664 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 St6galnac5Q9QYJ1 336 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 SrpxQ9R0M3 464 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 G6pc2Q9Z186 355 aa12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Eif3gQ9Z1D1 320 aaKnown RBP12.51□□□□□ -0.41
Nup88-202ENSMUST00000108530 Trav5-1A0A075B5Z7 114 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Mrgpra9A0A140T8U8 332 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 A0A1Y7VLU2 103 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ptprz1B9EKR1 2312 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 CckarO08786 436 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Foxf2O54743 446 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Bcl2P10417 236 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm10384Q3UQ87 92 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tgoln1Q62313 353 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Fam25cQ8CF02 89 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cd226Q8K4F0 333 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ykt6Q9CQW1 198 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 ShpkQ9D5J6 476 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 P2ry6Q9ERK9 328 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 FetubQ9QXC1 388 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Slc22a5Q9Z0E8 557 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 TpbgQ9Z0L0 426 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ankdd1aA0A1L1ST07 508 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Amy2a1E9PV85 245 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Efna4O08542 206 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Bet1lO35153 111 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gabra6P16305 453 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Aldh3a2P47740 484 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gabra1P62812 455 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms