RNA–Protein interactions for RNA: YOL087C

DUF1, Transcript of Ubiquitin-binding protein of unknown function, yeast

Gene DUF1, Length 3,351 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DUF1	YOL087C	RAD18	P10862	487 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	GUK1	P15454	187 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	NCP1	P16603	691 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	LAS1	P36146	502 aa	Predicted RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	SIF2	P38262	535 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	LAM1	P38851	1228 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	MBP1	P39678	833 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	OSW5	P40219	148 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	UTP18	P40362	594 aa	Predicted RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	FET5	P43561	622 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	STU2	P46675	888 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	ZIP2	P53061	704 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	TOF1	P53840	1238 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	TEP1	P53916	434 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	CIK1	Q01649	594 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	TOF2	Q02208	771 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	PNG1	Q02890	363 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	SKY1	Q03656	742 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	RRB1	Q04225	511 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	MGR3	Q04472	501 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	YDR338C	Q05497	695 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	NOP6	Q07623	225 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	PSY3	Q12318	242 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	SFI1	Q12369	946 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	PDH1	Q12428	516 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	YBL111C	Q3E7Y5	667 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	JIP3	O13555	125 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	MET17	P06106	444 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	APE1	P14904	514 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	YCL049C	P25577	312 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	KRE6	P32486	720 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	VPS17	P32913	551 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	MAE1	P36013	669 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	POL12	P38121	705 aa	Predicted RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	VPS45	P38932	577 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	YER010C	P40011	234 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	MPH1	P40562	993 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	YFL054C	P43549	646 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	AIM14	P53109	570 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	HOS3	Q02959	697 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	GTB1	Q04924	702 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	GGA1	Q06336	557 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	APC2	Q12440	853 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	AI1	P03875	834 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	RPS21A	P0C0V8	87 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	SYP1	P25623	870 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	ADK2	P26364	225 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	GPI10	P30777	616 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	ZIM17	P42844	174 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	EFM5	P53200	248 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	CPR6	P53691	371 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	YNR061C	P53747	219 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	YMR074C	Q04773	145 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	ADE13	Q05911	482 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	KAP95	Q06142	861 aa	Known RBP	3.17	□□□□□ -1.9
DUF1	YOL087C	MDM36	Q06820	579 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	TGL5	Q12043	749 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	HAL9	Q12180	1030 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	YDR215C	Q12240	137 aa		3.17	□□□□□ -1.9
DUF1	YOL087C	INO1	P11986	533 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	MSD1	P15179	658 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	CLC1	P17891	233 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	SGF29	P25554	259 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	GPT2	P36148	743 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	SAH1	P39954	449 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	ALD5	P40047	520 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	SIP5	P40210	489 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	SMK1	P41808	388 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	TCB2	P48231	1178 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	PSP2	P50109	593 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	RMT2	Q03305	412 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	ATG33	Q06485	197 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	GUD1	Q07729	489 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	BUG1	Q12191	341 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	RTN2	Q12443	393 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	APM4	Q99186	491 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	YOR019W	Q99248	730 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	FUM1	P08417	488 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	GCD1	P09032	578 aa	Predicted RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	DEP1	P31385	405 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	SSE1	P32589	693 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	RPT5	P33297	434 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	SUR1	P33300	382 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
DUF1	YOL087C	KDX1	P36005	433 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	PET10	P36139	283 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	ARL1	P38116	183 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	YAR028W	P39548	234 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	GDI1	P39958	451 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	EPL1	P43572	832 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	ENT3	P47160	408 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	VID30	P53076	958 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	SGF73	P53165	657 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	DSE4	P53753	1117 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	YAP6	Q03935	383 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	DOT1	Q04089	582 aa	Known RBP	3.16	□□□□□ -1.9
DUF1	YOL087C	HIM1	Q06674	414 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	RRT8	Q08219	342 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	MCA1	Q08601	432 aa		3.16	□□□□□ -1.9
DUF1	YOL087C	ARG3	P05150	338 aa		3.15	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms