RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	QRI7	P43122	407 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	MET12	P46151	657 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	HXT16	P47185	567 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	SPO1	P53541	631 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	MRPL22	P53881	309 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	RPN7	Q06103	429 aa	Known RBP	4.92	□□□□□ -1.62
RCM1	YNL022C	TSR2	Q06672	205 aa	Known RBP	4.92	□□□□□ -1.62
RCM1	YNL022C	MSS18	P08593	268 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	HSC82	P15108	705 aa	Known RBP	4.91	□□□□□ -1.62
RCM1	YNL022C	YCL002C	P25565	263 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	SEC65	P29478	273 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	SWC3	P31376	625 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	MCM10	P32354	571 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	EBP2	P36049	427 aa	Known RBP	4.91	□□□□□ -1.62
RCM1	YNL022C	YKR075C	P36155	307 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	MAL31	P38156	614 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	LAM1	P38851	1228 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	SAW1	P39735	261 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	URM1	P40554	99 aa	Predicted RBP	4.91	□□□□□ -1.62
RCM1	YNL022C	YBP2	P53169	641 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	CNM67	P53865	581 aa	Known RBP	4.91	□□□□□ -1.62
RCM1	YNL022C	GTR1	Q00582	310 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	BLS1	Q06071	122 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	TPO1	Q07824	586 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	RLP24	Q07915	199 aa	Known RBP	4.91	□□□□□ -1.62
RCM1	YNL022C	NOP12	Q08208	459 aa	Known RBP	4.91	□□□□□ -1.62
RCM1	YNL022C	THI21	Q08975	551 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	HFI1	Q12060	488 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	RTP1	Q12751	981 aa		4.91	□□□□□ -1.62
RCM1	YNL022C	RPS21B	Q3E754	87 aa	Known RBP	4.91	□□□□□ -1.62
RCM1	YNL022C	FBP1	P09201	348 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	SEC18	P18759	758 aa	Known RBP	4.9	□□□□□ -1.62
RCM1	YNL022C	MSM1	P22438	575 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	SER1	P33330	395 aa	Known RBP	4.9	□□□□□ -1.62
RCM1	YNL022C	OAF3	P36023	863 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	PPE1	P38796	400 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	HXT6	P39003	570 aa	Known RBP	4.9	□□□□□ -1.62
RCM1	YNL022C	HXT7	P39004	570 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	ASK10	P48361	1146 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	DUS1	P53759	423 aa	Known RBP	4.9	□□□□□ -1.62
RCM1	YNL022C	RMT2	Q03305	412 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	OPY2	Q06810	360 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	RXT3	Q07458	294 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	HAL9	Q12180	1030 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	YOR022C	Q12204	715 aa		4.9	□□□□□ -1.62
RCM1	YNL022C	SWI1	P09547	1314 aa		4.9	□□□□□ -1.63
RCM1	YNL022C	UTP10	P42945	1769 aa	Known RBP	4.9	□□□□□ -1.63
RCM1	YNL022C	MIH1	P23748	554 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	RPD3	P32561	433 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	BEM3	P32873	1128 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	YKR051W	P36142	418 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	CTF8	P38877	133 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	GTF1	P53260	183 aa	Predicted RBP	4.89	□□□□□ -1.63
RCM1	YNL022C	TEP1	P53916	434 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	ROT1	Q03691	256 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	PSK2	Q08217	1101 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	HMI1	Q12039	706 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	NUR1	Q12066	484 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	APM4	Q99186	491 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	YOL087C	Q99247	1116 aa		4.89	□□□□□ -1.63
RCM1	YNL022C	HIS5	P07172	385 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	SED4	P25365	1065 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	RER1	P25560	188 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	PET309	P32522	965 aa	Predicted RBP	4.88	□□□□□ -1.63
RCM1	YNL022C	TFC3	P34111	1160 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	NUP133	P36161	1157 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	MEF2	P39677	819 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	NDE1	P40215	560 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	SDP1	P40479	209 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	ERR3	P42222	437 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	SRB7	P47822	140 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	GPD1	Q00055	391 aa	Known RBP	4.88	□□□□□ -1.63
RCM1	YNL022C	GCN5	Q03330	439 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	VPS64	Q03944	604 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	SSL1	Q04673	461 aa	Predicted RBP	4.88	□□□□□ -1.63
RCM1	YNL022C	GPB1	Q08886	897 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	KCS1	Q12494	1050 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	NFU1	P32860	256 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	APL2	P36000	726 aa	Predicted RBP	4.88	□□□□□ -1.63
RCM1	YNL022C	SDS22	P36047	338 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	PSY4	P38193	441 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	YHR078W	P38799	552 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	HOS4	P40480	1083 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	ZIP2	P53061	704 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	VPS62	P53285	467 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	YDR132C	Q03900	495 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	SPC19	Q03954	165 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	NKP2	Q06162	153 aa		4.88	□□□□□ -1.63
RCM1	YNL022C	SNU66	Q12420	587 aa	Predicted RBP	4.88	□□□□□ -1.63
RCM1	YNL022C	LPD1	P09624	499 aa	Known RBP	4.87	□□□□□ -1.63
RCM1	YNL022C	PHO3	P24031	467 aa		4.87	□□□□□ -1.63
RCM1	YNL022C	GCD7	P32502	381 aa	Predicted RBP	4.87	□□□□□ -1.63
RCM1	YNL022C	RPN11	P43588	306 aa	Known RBP	4.87	□□□□□ -1.63
RCM1	YNL022C	PLB2	Q03674	706 aa		4.87	□□□□□ -1.63
RCM1	YNL022C	DUS4	Q06063	367 aa		4.87	□□□□□ -1.63
RCM1	YNL022C	YDR056C	Q12025	205 aa		4.87	□□□□□ -1.63
RCM1	YNL022C	CWC2	Q12046	339 aa	Predicted RBP	4.87	□□□□□ -1.63
RCM1	YNL022C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RCM1	YNL022C	Q0142	Q9ZZW4	58 aa		4.87	□□□□□ -1.63
RCM1	YNL022C	FOB1	O13329	566 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms