RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W BRR1Q99177 341 aaPredicted RBP2.58□□□□□ -2
UBP15YMR304W GPA2P10823 449 aa2.58□□□□□ -2
UBP15YMR304W POT1P27796 417 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
UBP15YMR304W RAD24P32641 659 aa2.58□□□□□ -2
UBP15YMR304W PIH1P38768 344 aa2.58□□□□□ -2
UBP15YMR304W YHR218WP38899 603 aa2.58□□□□□ -2
UBP15YMR304W VTC2P43585 828 aa2.58□□□□□ -2
UBP15YMR304W IML2P47031 731 aa2.58□□□□□ -2
UBP15YMR304W JJJ3P47138 172 aa2.58□□□□□ -2
UBP15YMR304W JHD2P47156 728 aaPredicted RBP2.58□□□□□ -2
UBP15YMR304W YGR153WP48238 217 aa2.58□□□□□ -2
UBP15YMR304W PDS5Q04264 1277 aa2.58□□□□□ -2
UBP15YMR304W STE23Q06010 1027 aa2.58□□□□□ -2
UBP15YMR304W SMD2Q06217 110 aaKnown RBP2.58□□□□□ -2
UBP15YMR304W THI72Q08579 599 aa2.58□□□□□ -2
UBP15YMR304W ATP16Q12165 160 aa2.58□□□□□ -2
UBP15YMR304W YBL111CQ3E7Y5 667 aa2.58□□□□□ -2
UBP15YMR304W VAN1P23642 535 aa2.57□□□□□ -2
UBP15YMR304W SFP1P32432 683 aa2.57□□□□□ -2
UBP15YMR304W STV1P37296 890 aa2.57□□□□□ -2
UBP15YMR304W YPT32P51996 222 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W EIS1Q05050 843 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W GIC2Q06648 383 aa2.57□□□□□ -2
UBP15YMR304W PGI1P12709 554 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W SEN2P16658 377 aa2.57□□□□□ -2
UBP15YMR304W GFD2P25370 566 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W DUR3P33413 735 aa2.57□□□□□ -2
UBP15YMR304W MDJ1P35191 511 aa2.57□□□□□ -2
UBP15YMR304W MAK5P38112 773 aaPredicted RBP2.57□□□□□ -2
UBP15YMR304W ECM31P38122 312 aa2.57□□□□□ -2
UBP15YMR304W TSC10P38342 320 aa2.57□□□□□ -2
UBP15YMR304W SDH8P38345 138 aa2.57□□□□□ -2
UBP15YMR304W AST2P39945 430 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W SAP1P39955 897 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W SNL1P40548 159 aa2.57□□□□□ -2
UBP15YMR304W URB2P47108 1174 aa2.57□□□□□ -2
UBP15YMR304W DYN3Q04949 312 aa2.57□□□□□ -2
UBP15YMR304W MRX10Q05648 414 aa2.57□□□□□ -2
UBP15YMR304W YOR223WQ12015 292 aa2.57□□□□□ -2
UBP15YMR304W YPR063CQ12160 140 aa2.57□□□□□ -2
UBP15YMR304W GAL4P04386 881 aa2.57□□□□□ -2
UBP15YMR304W THR1P17423 357 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W BET2P20133 325 aa2.57□□□□□ -2
UBP15YMR304W HCA4P20448 770 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W APA2P22108 325 aa2.57□□□□□ -2
UBP15YMR304W FPS1P23900 669 aa2.57□□□□□ -2
UBP15YMR304W RAD57P25301 460 aa2.57□□□□□ -2
UBP15YMR304W SRP40P32583 406 aaPredicted RBP2.57□□□□□ -2
UBP15YMR304W MRE11P32829 692 aa2.57□□□□□ -2
UBP15YMR304W SSO1P32867 290 aa2.57□□□□□ -2
UBP15YMR304W SMC1P32908 1225 aa2.57□□□□□ -2
UBP15YMR304W YKL091CP33324 310 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W NUF2P33895 451 aa2.57□□□□□ -2
UBP15YMR304W BOI1P38041 980 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W YBR225WP38321 900 aa2.57□□□□□ -2
UBP15YMR304W MNP1P53163 194 aaPredicted RBP2.57□□□□□ -2
UBP15YMR304W ALD6P54115 500 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W YKR005CQ02203 525 aa2.57□□□□□ -2
UBP15YMR304W YDR179W-AQ03983 463 aa2.57□□□□□ -2
UBP15YMR304W SFH1Q06168 426 aa2.57□□□□□ -2
UBP15YMR304W YCG1Q06680 1035 aa2.57□□□□□ -2
UBP15YMR304W GUD1Q07729 489 aa2.57□□□□□ -2
UBP15YMR304W ESC8Q08119 714 aa2.57□□□□□ -2
UBP15YMR304W PUS7Q08647 676 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W YPL225WQ08971 146 aaKnown RBP2.57□□□□□ -2
UBP15YMR304W APC11Q12157 165 aa2.57□□□□□ -2
UBP15YMR304W TAF3Q12297 353 aa2.57□□□□□ -2
UBP15YMR304W ARP6Q12509 438 aa2.57□□□□□ -2
UBP15YMR304W TSC13Q99190 310 aa2.57□□□□□ -2
UBP15YMR304W AI1P03875 834 aa2.56□□□□□ -2
UBP15YMR304W CAF20P12962 161 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W TAL1P15019 335 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W PUP3P25451 205 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W YUR1P26725 428 aa2.56□□□□□ -2
UBP15YMR304W KRE6P32486 720 aa2.56□□□□□ -2
UBP15YMR304W RML2P32611 393 aa2.56□□□□□ -2
UBP15YMR304W AST1P35183 429 aa2.56□□□□□ -2
UBP15YMR304W YKL050CP35736 922 aa2.56□□□□□ -2
UBP15YMR304W MRPL16P38064 232 aa2.56□□□□□ -2
UBP15YMR304W CHK1P38147 527 aa2.56□□□□□ -2
UBP15YMR304W RFC5P38251 354 aa2.56□□□□□ -2
UBP15YMR304W LAM1P38851 1228 aa2.56□□□□□ -2
UBP15YMR304W PCF11P39081 626 aaPredicted RBP2.56□□□□□ -2
UBP15YMR304W ACA1P39970 489 aa2.56□□□□□ -2
UBP15YMR304W PSP1P50896 841 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W PCL10P53124 433 aa2.56□□□□□ -2
UBP15YMR304W YMR206WQ03695 313 aa2.56□□□□□ -2
UBP15YMR304W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
UBP15YMR304W YPL278CQ08990 100 aa2.56□□□□□ -2
UBP15YMR304W HOS1Q12214 470 aa2.56□□□□□ -2
UBP15YMR304W TRP3P00937 484 aa2.56□□□□□ -2
UBP15YMR304W RNA1P11745 407 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W SRS2P12954 1174 aa2.56□□□□□ -2
UBP15YMR304W VMA2P16140 517 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W UBA1P22515 1024 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W RGD1P38339 666 aa2.56□□□□□ -2
UBP15YMR304W REV7P38927 245 aa2.56□□□□□ -2
UBP15YMR304W DHH1P39517 506 aaKnown RBP2.56□□□□□ -2
UBP15YMR304W PTI1P39927 425 aaPredicted RBP2.56□□□□□ -2
UBP15YMR304W YER186CP40101 306 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms