RNA–Protein interactions for RNA: YLR407W

YLR407W, Transcript of Putative protein of unknown function, yeast

Gene YLR407W, Length 687 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR407W	YLR407W	EAF1	Q06337	982 aa		5.01	□□□□□ -1.61
YLR407W	YLR407W	IRC3	Q06683	689 aa		5.01	□□□□□ -1.61
YLR407W	YLR407W	THI3	Q07471	609 aa		5.01	□□□□□ -1.61
YLR407W	YLR407W	HBN1	Q96VH4	193 aa		5.01	□□□□□ -1.61
YLR407W	YLR407W	FIG2	P25653	1609 aa		5.01	□□□□□ -1.61
YLR407W	YLR407W	CIT2	P08679	460 aa		5	□□□□□ -1.61
YLR407W	YLR407W	YJL049W	P47048	450 aa		5	□□□□□ -1.61
YLR407W	YLR407W	YAP1802	P53309	568 aa		5	□□□□□ -1.61
YLR407W	YLR407W	LRS4	Q04087	347 aa	Known RBP	5	□□□□□ -1.61
YLR407W	YLR407W	LSP1	Q12230	341 aa	Known RBP	5	□□□□□ -1.61
YLR407W	YLR407W	TAF3	Q12297	353 aa		5	□□□□□ -1.61
YLR407W	YLR407W	RRI2	Q12348	645 aa		5	□□□□□ -1.61
YLR407W	YLR407W	RNR2	P09938	399 aa	Known RBP	4.99	□□□□□ -1.61
YLR407W	YLR407W	TPM1	P17536	199 aa	Known RBP	4.99	□□□□□ -1.61
YLR407W	YLR407W	KRE2	P27809	442 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	TMT1	P32643	299 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	RRP14	P36080	434 aa	Known RBP	4.99	□□□□□ -1.61
YLR407W	YLR407W	VPS24	P36095	224 aa	Known RBP	4.99	□□□□□ -1.61
YLR407W	YLR407W	SPL2	P38839	148 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	SPO22	P40511	975 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	OSW7	P43611	510 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	ALG12	P53730	551 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	ERO1	Q03103	563 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	THI21	Q08975	551 aa		4.99	□□□□□ -1.61
YLR407W	YLR407W	YCL002C	P25565	263 aa		4.98	□□□□□ -1.61
YLR407W	YLR407W	SMY1	P32364	656 aa	Known RBP	4.98	□□□□□ -1.61
YLR407W	YLR407W	HIR1	P32479	840 aa		4.98	□□□□□ -1.61
YLR407W	YLR407W	EMC3	P36039	253 aa		4.98	□□□□□ -1.61
YLR407W	YLR407W	SET5	P38890	526 aa	Known RBP	4.98	□□□□□ -1.61
YLR407W	YLR407W	REV7	P38927	245 aa		4.98	□□□□□ -1.61
YLR407W	YLR407W	NDC80	P40460	691 aa		4.98	□□□□□ -1.61
YLR407W	YLR407W	CCT7	P42943	550 aa	Known RBP	4.98	□□□□□ -1.61
YLR407W	YLR407W	RPN4	Q03465	531 aa		4.98	□□□□□ -1.61
YLR407W	YLR407W	SPO75	Q07798	868 aa		4.98	□□□□□ -1.61
YLR407W	YLR407W	WRS1	Q12109	432 aa	Known RBP	4.98	□□□□□ -1.61
YLR407W	YLR407W	LAM4	P38800	1345 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	CYB2	P00175	591 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	LCB1	P25045	558 aa	Known RBP	4.97	□□□□□ -1.61
YLR407W	YLR407W	RPL8B	P29453	256 aa	Known RBP	4.97	□□□□□ -1.61
YLR407W	YLR407W	YBR259W	P38338	688 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	BAP3	P41815	604 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	ATG36	P46983	293 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	MTR3	P48240	250 aa	Predicted RBP	4.97	□□□□□ -1.61
YLR407W	YLR407W	RPT4	P53549	437 aa	Known RBP	4.97	□□□□□ -1.61
YLR407W	YLR407W	EAF7	P53911	425 aa	Known RBP	4.97	□□□□□ -1.61
YLR407W	YLR407W	IRC4	Q03036	179 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	UBX2	Q04228	584 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	GAD1	Q04792	585 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	PSF3	Q12146	194 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	TAH18	Q12181	623 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	GPR1	Q12361	961 aa		4.97	□□□□□ -1.61
YLR407W	YLR407W	RPN13	O13563	156 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	CTT1	P06115	562 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
YLR407W	YLR407W	ARE1	P25628	610 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	GRX7	P38068	203 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	YMR147W	P40218	223 aa	Known RBP	4.96	□□□□□ -1.62
YLR407W	YLR407W	ENP2	P48234	707 aa	Known RBP	4.96	□□□□□ -1.62
YLR407W	YLR407W	GLO1	P50107	326 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	SEC5	P89102	971 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	VPS20	Q04272	221 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	INM2	Q05533	292 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	REH1	Q06709	432 aa		4.96	□□□□□ -1.62
YLR407W	YLR407W	EMP70	P32802	667 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
YLR407W	YLR407W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
YLR407W	YLR407W	CCT3	P39077	534 aa	Known RBP	4.95	□□□□□ -1.62
YLR407W	YLR407W	YEL020C	P39994	560 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	GYP8	P43570	497 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	YFH7	P43591	353 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	UBP6	P43593	499 aa	Known RBP	4.95	□□□□□ -1.62
YLR407W	YLR407W	IRC8	P47046	822 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	NPA3	P47122	385 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	EAF6	P47128	113 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	NAN1	Q02931	896 aa	Known RBP	4.95	□□□□□ -1.62
YLR407W	YLR407W	MRI1	Q06489	411 aa	Known RBP	4.95	□□□□□ -1.62
YLR407W	YLR407W	CDC53	Q12018	815 aa	Known RBP	4.95	□□□□□ -1.62
YLR407W	YLR407W	GRX6	Q12438	231 aa		4.95	□□□□□ -1.62
YLR407W	YLR407W	GSC2	P40989	1895 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	SIR3	P06701	978 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	PYC1	P11154	1178 aa	Known RBP	4.94	□□□□□ -1.62
YLR407W	YLR407W	ROX1	P25042	368 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	PEP3	P27801	918 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	MSP1	P28737	362 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	ORC2	P32833	620 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	CRG1	P38892	291 aa	RIP-Chip data	4.94	□□□□□ -1.62	not detected
YLR407W	YLR407W	BDH2	P39713	417 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	DJP1	P40564	432 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	BUD6	P41697	788 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	RTS3	P53289	263 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	YGR283C	P53336	341 aa	Predicted RBP	4.94	□□□□□ -1.62
YLR407W	YLR407W	TEX1	P53851	422 aa	Known RBP	4.94	□□□□□ -1.62
YLR407W	YLR407W	OSH2	Q12451	1283 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	YKL033W-A	Q86ZR7	236 aa		4.94	□□□□□ -1.62
YLR407W	YLR407W	RPL19A	P0CX82	189 aa	Known RBP	4.93	□□□□□ -1.62
YLR407W	YLR407W	RPL19B	P0CX83	189 aa	Predicted RBP	4.93	□□□□□ -1.62
YLR407W	YLR407W	BIK1	P11709	440 aa		4.93	□□□□□ -1.62
YLR407W	YLR407W	COQ1	P18900	473 aa		4.93	□□□□□ -1.62
YLR407W	YLR407W	TSR4	P25040	408 aa		4.93	□□□□□ -1.62
YLR407W	YLR407W	YKU70	P32807	602 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms