RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C HMO1Q03973 246 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C ECM18Q04623 453 aa5.05□□□□□ -1.6
SEC9YGR009C BSC2Q05611 235 aa5.05□□□□□ -1.6
SEC9YGR009C UTP21Q06078 939 aaPredicted RBP5.05□□□□□ -1.6
SEC9YGR009C PDR8Q06149 701 aa5.05□□□□□ -1.6
SEC9YGR009C VAC14Q06708 880 aa5.05□□□□□ -1.6
SEC9YGR009C GYP5Q12344 894 aa5.05□□□□□ -1.6
SEC9YGR009C FRE6Q12473 712 aa5.05□□□□□ -1.6
SEC9YGR009C NUP145P49687 1317 aa5.04□□□□□ -1.6
SEC9YGR009C PDR18P53756 1333 aa5.04□□□□□ -1.6
SEC9YGR009C ENO2P00925 437 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C BI4P03879 638 aa5.04□□□□□ -1.6
SEC9YGR009C RAP1P11938 827 aa5.04□□□□□ -1.6
SEC9YGR009C ALG1P16661 449 aa5.04□□□□□ -1.6
SEC9YGR009C PFK2P16862 959 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SEC9YGR009C MRPS28P21771 286 aa5.04□□□□□ -1.6
SEC9YGR009C SUR1P33300 382 aa5.04□□□□□ -1.6
SEC9YGR009C YKL069WP36088 180 aa5.04□□□□□ -1.6
SEC9YGR009C APM3P38153 483 aa5.04□□□□□ -1.6
SEC9YGR009C RGD1P38339 666 aa5.04□□□□□ -1.6
SEC9YGR009C GDI1P39958 451 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C SYG1P40528 902 aa5.04□□□□□ -1.6
SEC9YGR009C CEP3P40969 608 aa5.04□□□□□ -1.6
SEC9YGR009C MNN11P46985 422 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C LOH1P47055 219 aa5.04□□□□□ -1.6
SEC9YGR009C TYW3P53177 273 aa5.04□□□□□ -1.6
SEC9YGR009C MUK1Q02866 612 aa5.04□□□□□ -1.6
SEC9YGR009C YPL107WQ02873 248 aa5.04□□□□□ -1.6
SEC9YGR009C URC2Q04411 772 aa5.04□□□□□ -1.6
SEC9YGR009C GIM5Q04493 163 aa5.04□□□□□ -1.6
SEC9YGR009C NDE2Q07500 545 aa5.04□□□□□ -1.6
SEC9YGR009C YDL144CQ07589 356 aa5.04□□□□□ -1.6
SEC9YGR009C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SEC9YGR009C SIL1Q08199 421 aa5.04□□□□□ -1.6
SEC9YGR009C TRE2Q08693 809 aa5.04□□□□□ -1.6
SEC9YGR009C YDL109CQ12103 647 aa5.04□□□□□ -1.6
SEC9YGR009C MMP1Q12372 583 aa5.04□□□□□ -1.6
SEC9YGR009C RPS9AO13516 197 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C CDC19P00549 500 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C RPS9BP05755 195 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C SNF1P06782 633 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C ARG80P07249 177 aa5.04□□□□□ -1.6
SEC9YGR009C DBF2P22204 572 aa5.04□□□□□ -1.6
SEC9YGR009C RRP7P25368 297 aaPredicted RBP5.04□□□□□ -1.6
SEC9YGR009C FUN30P31380 1131 aa5.04□□□□□ -1.6
SEC9YGR009C RAD54P32863 898 aa5.04□□□□□ -1.6
SEC9YGR009C YKR015CP36111 568 aa5.04□□□□□ -1.6
SEC9YGR009C SWC5P38326 303 aa5.04□□□□□ -1.6
SEC9YGR009C GIP4P39732 760 aa5.04□□□□□ -1.6
SEC9YGR009C JLP2P40206 208 aa5.04□□□□□ -1.6
SEC9YGR009C DLD2P46681 530 aaKnown RBP5.04□□□□□ -1.6
SEC9YGR009C PAN2P53010 1115 aaPredicted RBP5.04□□□□□ -1.6
SEC9YGR009C SSL2Q00578 843 aa5.04□□□□□ -1.6
SEC9YGR009C BET4Q00618 327 aa5.04□□□□□ -1.6
SEC9YGR009C SNP1Q00916 300 aaPredicted RBP5.04□□□□□ -1.6
SEC9YGR009C BOP2Q06150 570 aa5.04□□□□□ -1.6
SEC9YGR009C YLR455WQ06188 304 aa5.04□□□□□ -1.6
SEC9YGR009C YEH2Q07950 538 aa5.04□□□□□ -1.6
SEC9YGR009C FAP7Q12055 197 aaPredicted RBP5.04□□□□□ -1.6
SEC9YGR009C DIN7Q12086 430 aa5.04□□□□□ -1.6
SEC9YGR009C ECM5Q03214 1411 aa5.03□□□□□ -1.6
SEC9YGR009C TDH1P00360 332 aaKnown RBP5.03□□□□□ -1.6
SEC9YGR009C AAC3P18238 307 aa5.03□□□□□ -1.6
SEC9YGR009C DPB2P24482 689 aaPredicted RBP5.03□□□□□ -1.6
SEC9YGR009C NAM9P27929 486 aa5.03□□□□□ -1.6
SEC9YGR009C ZIP1P31111 875 aa5.03□□□□□ -1.6
SEC9YGR009C PAH1P32567 862 aa5.03□□□□□ -1.6
SEC9YGR009C RPT1P33299 467 aaKnown RBP5.03□□□□□ -1.6
SEC9YGR009C TPO5P36029 618 aa5.03□□□□□ -1.6
SEC9YGR009C CAF4P36130 643 aa5.03□□□□□ -1.6
SEC9YGR009C ECM2P38241 364 aaKnown RBP5.03□□□□□ -1.6
SEC9YGR009C SIF2P38262 535 aa5.03□□□□□ -1.6
SEC9YGR009C RTT107P38850 1070 aa5.03□□□□□ -1.6
SEC9YGR009C SPF1P39986 1215 aaKnown RBP5.03□□□□□ -1.6
SEC9YGR009C HIS6P40545 261 aa5.03□□□□□ -1.6
SEC9YGR009C RMD8P43620 662 aa5.03□□□□□ -1.6
SEC9YGR009C NIT3P49954 291 aa5.03□□□□□ -1.6
SEC9YGR009C ROM1P53046 1155 aa5.03□□□□□ -1.6
SEC9YGR009C SNF12P53628 566 aa5.03□□□□□ -1.6
SEC9YGR009C RLI1Q03195 608 aaKnown RBP5.03□□□□□ -1.6
SEC9YGR009C ISR1Q06098 443 aaKnown RBP5.03□□□□□ -1.6
SEC9YGR009C VPS54Q12071 889 aa5.03□□□□□ -1.6
SEC9YGR009C RAD9P14737 1309 aa5.03□□□□□ -1.6
SEC9YGR009C BMT2P38278 337 aa5.02□□□□□ -1.61
SEC9YGR009C SUR2P38992 349 aa5.02□□□□□ -1.61
SEC9YGR009C XDJ1P39102 459 aa5.02□□□□□ -1.61
SEC9YGR009C BOL3P39724 118 aa5.02□□□□□ -1.61
SEC9YGR009C HXT8P40886 569 aa5.02□□□□□ -1.61
SEC9YGR009C ULI1P43604 169 aa5.02□□□□□ -1.61
SEC9YGR009C YJL171CP46992 396 aa5.02□□□□□ -1.61
SEC9YGR009C HAM1P47119 197 aaKnown RBP5.02□□□□□ -1.61
SEC9YGR009C PSP2P50109 593 aaKnown RBP5.02□□□□□ -1.61
SEC9YGR009C YGR012WP53206 393 aa5.02□□□□□ -1.61
SEC9YGR009C PEF1P53238 335 aa5.02□□□□□ -1.61
SEC9YGR009C MRPL50P53724 139 aa5.02□□□□□ -1.61
SEC9YGR009C CIK1Q01649 594 aa5.02□□□□□ -1.61
SEC9YGR009C MRS2Q01926 470 aa5.02□□□□□ -1.61
SEC9YGR009C CLU1Q03690 1277 aaKnown RBP5.02□□□□□ -1.61
SEC9YGR009C USA1Q03714 838 aa5.02□□□□□ -1.61
SEC9YGR009C TAF12Q03761 539 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms