RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W UTP6Q02354 440 aaKnown RBP5.72□□□□□ -1.49
SHE10YGL228W INA17Q02888 182 aa5.72□□□□□ -1.49
SHE10YGL228W TAF9Q05027 157 aa5.72□□□□□ -1.49
SHE10YGL228W KAP95Q06142 861 aaKnown RBP5.72□□□□□ -1.49
SHE10YGL228W SDH5Q08230 162 aa5.72□□□□□ -1.49
SHE10YGL228W APL5Q08951 932 aaKnown RBP5.72□□□□□ -1.49
SHE10YGL228W NBP2Q12163 236 aa5.72□□□□□ -1.49
SHE10YGL228W VPS5Q92331 675 aa5.72□□□□□ -1.49
SHE10YGL228W TUB3P09734 445 aaKnown RBP5.71□□□□□ -1.49
SHE10YGL228W LTV1P34078 463 aa5.71□□□□□ -1.49
SHE10YGL228W LAS1P36146 502 aaPredicted RBP5.71□□□□□ -1.49
SHE10YGL228W ECM2P38241 364 aaKnown RBP5.71□□□□□ -1.49
SHE10YGL228W SAK1P38990 1142 aa5.71□□□□□ -1.49
SHE10YGL228W FLC2P39719 783 aa5.71□□□□□ -1.49
SHE10YGL228W SAP1P39955 897 aaKnown RBP5.71□□□□□ -1.49
SHE10YGL228W YMR134WP40207 237 aa5.71□□□□□ -1.49
SHE10YGL228W TMA108P40462 946 aa5.71□□□□□ -1.49
SHE10YGL228W FAF1P40546 346 aaPredicted RBP5.71□□□□□ -1.49
SHE10YGL228W YIR016WP40572 265 aa5.71□□□□□ -1.49
SHE10YGL228W CDC1P40986 491 aa5.71□□□□□ -1.49
SHE10YGL228W RSM26P47141 266 aa5.71□□□□□ -1.49
SHE10YGL228W YML6P51998 286 aa5.71□□□□□ -1.49
SHE10YGL228W ADA2Q02336 434 aa5.71□□□□□ -1.49
SHE10YGL228W RKM2Q03942 479 aa5.71□□□□□ -1.49
SHE10YGL228W MRI1Q06489 411 aaKnown RBP5.71□□□□□ -1.49
SHE10YGL228W LEA1Q08963 238 aaPredicted RBP5.71□□□□□ -1.49
SHE10YGL228W YDR018CQ12185 396 aa5.71□□□□□ -1.49
SHE10YGL228W CDC8P00572 216 aa5.71□□□□□ -1.5
SHE10YGL228W PDR1P12383 1068 aa5.71□□□□□ -1.5
SHE10YGL228W YCR015CP25616 317 aa5.71□□□□□ -1.5
SHE10YGL228W SPT5P27692 1063 aaKnown RBP5.71□□□□□ -1.5
SHE10YGL228W MEI4P29467 408 aa5.71□□□□□ -1.5
SHE10YGL228W YBR053CP38235 358 aa5.71□□□□□ -1.5
SHE10YGL228W VHC1P38329 1120 aa5.71□□□□□ -1.5
SHE10YGL228W RAD55P38953 406 aa5.71□□□□□ -1.5
SHE10YGL228W FMP10P40098 244 aa5.71□□□□□ -1.5
SHE10YGL228W TGL3P40308 642 aa5.71□□□□□ -1.5
SHE10YGL228W RSC8P43609 557 aaKnown RBP5.71□□□□□ -1.5
SHE10YGL228W GUF1P46943 645 aa5.71□□□□□ -1.5
SHE10YGL228W HRD3Q05787 833 aa5.71□□□□□ -1.5
SHE10YGL228W THI7Q05998 598 aa5.71□□□□□ -1.5
SHE10YGL228W THI20Q08224 551 aa5.71□□□□□ -1.5
SHE10YGL228W TAF10Q12030 206 aa5.71□□□□□ -1.5
SHE10YGL228W RIO1Q12196 484 aaKnown RBP5.71□□□□□ -1.5
SHE10YGL228W YKL068W-AQ3E826 78 aa5.71□□□□□ -1.5
SHE10YGL228W PAB1P04147 577 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SHE10YGL228W ATP1P07251 545 aaKnown RBP5.7□□□□□ -1.5
SHE10YGL228W ECM32P32644 1121 aaKnown RBP5.7□□□□□ -1.5
SHE10YGL228W OLA1P38219 394 aaKnown RBP5.7□□□□□ -1.5
SHE10YGL228W LYS9P38999 446 aa5.7□□□□□ -1.5
SHE10YGL228W FHL1P39521 936 aa5.7□□□□□ -1.5
SHE10YGL228W ARG2P40360 574 aa5.7□□□□□ -1.5
SHE10YGL228W MET13P53128 600 aa5.7□□□□□ -1.5
SHE10YGL228W YNL144CP53907 740 aa5.7□□□□□ -1.5
SHE10YGL228W YML083CQ04526 418 aa5.7□□□□□ -1.5
SHE10YGL228W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SHE10YGL228W THI21Q08975 551 aa5.7□□□□□ -1.5
SHE10YGL228W MAS1P10507 462 aa5.69□□□□□ -1.5
SHE10YGL228W CBF1P17106 351 aa5.69□□□□□ -1.5
SHE10YGL228W SLY1P22213 666 aa5.69□□□□□ -1.5
SHE10YGL228W PLC1P32383 869 aa5.69□□□□□ -1.5
SHE10YGL228W VPH1P32563 840 aaKnown RBP5.69□□□□□ -1.5
SHE10YGL228W UBC6P33296 250 aaPredicted RBP5.69□□□□□ -1.5
SHE10YGL228W MAC1P35192 417 aa5.69□□□□□ -1.5
SHE10YGL228W SPP381P38282 291 aaPredicted RBP5.69□□□□□ -1.5
SHE10YGL228W ERP2P39704 215 aa5.69□□□□□ -1.5
SHE10YGL228W MAF1P41910 395 aa5.69□□□□□ -1.5
SHE10YGL228W RRT5P43607 289 aa5.69□□□□□ -1.5
SHE10YGL228W VTC4P47075 721 aa5.69□□□□□ -1.5
SHE10YGL228W YNL108CP53929 270 aa5.69□□□□□ -1.5
SHE10YGL228W KTR6P54070 446 aa5.69□□□□□ -1.5
SHE10YGL228W HER2Q03557 464 aa5.69□□□□□ -1.5
SHE10YGL228W SPG3Q04398 127 aaPredicted RBP5.69□□□□□ -1.5
SHE10YGL228W PNP1Q05788 311 aa5.69□□□□□ -1.5
SHE10YGL228W FAP7Q12055 197 aaPredicted RBP5.69□□□□□ -1.5
SHE10YGL228W IZH4Q99393 312 aa5.69□□□□□ -1.5
SHE10YGL228W RAD1P06777 1100 aa5.68□□□□□ -1.5
SHE10YGL228W GCR1P07261 785 aa5.68□□□□□ -1.5
SHE10YGL228W YML002WP0CF17 737 aa5.68□□□□□ -1.5
SHE10YGL228W YPK1P12688 680 aaKnown RBP5.68□□□□□ -1.5
SHE10YGL228W PGS1P25578 521 aa5.68□□□□□ -1.5
SHE10YGL228W URK1P27515 501 aa5.68□□□□□ -1.5
SHE10YGL228W MET4P32389 672 aa5.68□□□□□ -1.5
SHE10YGL228W DSS4P32601 143 aa5.68□□□□□ -1.5
SHE10YGL228W AIM26P32858 118 aa5.68□□□□□ -1.5
SHE10YGL228W DUG2P38149 878 aa5.68□□□□□ -1.5
SHE10YGL228W SSP1P38871 571 aa5.68□□□□□ -1.5
SHE10YGL228W SAP185P40856 1058 aa5.68□□□□□ -1.5
SHE10YGL228W MVP1P40959 511 aaKnown RBP5.68□□□□□ -1.5
SHE10YGL228W TAF1P46677 1066 aa5.68□□□□□ -1.5
SHE10YGL228W YNL247WP53852 767 aaKnown RBP5.68□□□□□ -1.5
SHE10YGL228W NMA111P53920 997 aa5.68□□□□□ -1.5
SHE10YGL228W ECM22Q05958 814 aaPredicted RBP5.68□□□□□ -1.5
SHE10YGL228W SFH1Q06168 426 aa5.68□□□□□ -1.5
SHE10YGL228W FMP25Q08023 583 aa5.68□□□□□ -1.5
SHE10YGL228W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
SHE10YGL228W RRD2Q12461 358 aa5.68□□□□□ -1.5
SHE10YGL228W UBR1P19812 1950 aa5.68□□□□□ -1.5
SHE10YGL228W ARG4P04076 463 aaPredicted RBP5.68□□□□□ -1.5
SHE10YGL228W CDC24P11433 854 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms