RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W HUL5P53119 910 aa5.55□□□□□ -1.52
SPT3YDR392W YNL193WP53870 558 aa5.55□□□□□ -1.52
SPT3YDR392W DNL4Q08387 944 aaPredicted RBP5.55□□□□□ -1.52
SPT3YDR392W YOR022CQ12204 715 aa5.55□□□□□ -1.52
SPT3YDR392W CYC1P00044 109 aaPredicted RBP5.54□□□□□ -1.52
SPT3YDR392W CTS1P29029 562 aa5.54□□□□□ -1.52
SPT3YDR392W SSF1P38789 453 aaPredicted RBP5.54□□□□□ -1.52
SPT3YDR392W YEL025CP39991 1188 aa5.54□□□□□ -1.52
SPT3YDR392W DOT6P40059 670 aaKnown RBP5.54□□□□□ -1.52
SPT3YDR392W VID27P40157 782 aa5.54□□□□□ -1.52
SPT3YDR392W RMD8P43620 662 aa5.54□□□□□ -1.52
SPT3YDR392W SMA1Q02651 245 aa5.54□□□□□ -1.52
SPT3YDR392W HXK1P04806 485 aaKnown RBP5.53□□□□□ -1.52
SPT3YDR392W ERG6P25087 383 aaKnown RBP5.53□□□□□ -1.52
SPT3YDR392W DOM34P33309 386 aa5.53□□□□□ -1.52
SPT3YDR392W YKL050CP35736 922 aa5.53□□□□□ -1.52
SPT3YDR392W ALG3P38179 458 aa5.53□□□□□ -1.52
SPT3YDR392W RXT2P38255 430 aa5.53□□□□□ -1.52
SPT3YDR392W VPS45P38932 577 aa5.53□□□□□ -1.52
SPT3YDR392W LTP1P40347 161 aa5.53□□□□□ -1.52
SPT3YDR392W GIS1Q03833 894 aa5.53□□□□□ -1.52
SPT3YDR392W ENT2Q05785 613 aa5.53□□□□□ -1.52
SPT3YDR392W HAP2P06774 265 aa5.52□□□□□ -1.53
SPT3YDR392W KGD2P19262 463 aaPredicted RBP5.52□□□□□ -1.53
SPT3YDR392W SWE1P32944 819 aa5.52□□□□□ -1.53
SPT3YDR392W VPS8P39702 1274 aa5.52□□□□□ -1.53
SPT3YDR392W PIC2P40035 300 aa5.52□□□□□ -1.53
SPT3YDR392W GYP7P48365 746 aa5.52□□□□□ -1.53
SPT3YDR392W RSM24Q03976 319 aa5.52□□□□□ -1.53
SPT3YDR392W MCP2Q06567 569 aa5.52□□□□□ -1.53
SPT3YDR392W CCR4P31384 837 aaKnown RBP5.51□□□□□ -1.53
SPT3YDR392W GGA2P38817 585 aaKnown RBP5.51□□□□□ -1.53
SPT3YDR392W FPR3P38911 411 aaKnown RBP5.51□□□□□ -1.53
SPT3YDR392W LAM5P43560 674 aa5.51□□□□□ -1.53
SPT3YDR392W BIR1P47134 954 aa5.51□□□□□ -1.53
SPT3YDR392W YOL024WQ08172 172 aa5.51□□□□□ -1.53
SPT3YDR392W MCD1Q12158 566 aa5.51□□□□□ -1.53
SPT3YDR392W SPO21Q12411 609 aa5.51□□□□□ -1.53
SPT3YDR392W CIT1P00890 479 aa5.5□□□□□ -1.53
SPT3YDR392W DED1P06634 604 aaKnown RBP5.5□□□□□ -1.53
SPT3YDR392W WHI2P12611 486 aa5.5□□□□□ -1.53
SPT3YDR392W FPR1P20081 114 aaKnown RBP5.5□□□□□ -1.53
SPT3YDR392W SEC20P28791 383 aa5.5□□□□□ -1.53
SPT3YDR392W RPT1P33299 467 aaKnown RBP5.5□□□□□ -1.53
SPT3YDR392W RFC5P38251 354 aa5.5□□□□□ -1.53
SPT3YDR392W TIF5P38431 405 aaKnown RBP5.5□□□□□ -1.53
SPT3YDR392W YJR061WP40355 935 aa5.5□□□□□ -1.53
SPT3YDR392W MRPS18P42847 217 aa5.5□□□□□ -1.53
SPT3YDR392W IGO1P53897 168 aa5.5□□□□□ -1.53
SPT3YDR392W ROT1Q03691 256 aa5.5□□□□□ -1.53
SPT3YDR392W RPL1AP0CX43 217 aaKnown RBP5.49□□□□□ -1.53
SPT3YDR392W RPL1BP0CX44 217 aaKnown RBP5.49□□□□□ -1.53
SPT3YDR392W RSA4P25382 515 aaKnown RBP5.49□□□□□ -1.53
SPT3YDR392W PMI40P29952 429 aaKnown RBP5.49□□□□□ -1.53
SPT3YDR392W STE5P32917 917 aa5.49□□□□□ -1.53
SPT3YDR392W FET5P43561 622 aa5.49□□□□□ -1.53
SPT3YDR392W FMS1P50264 508 aa5.49□□□□□ -1.53
SPT3YDR392W LSB1P53281 241 aa5.49□□□□□ -1.53
SPT3YDR392W WHI5Q12416 295 aa5.49□□□□□ -1.53
SPT3YDR392W RAD61Q99359 647 aa5.49□□□□□ -1.53
SPT3YDR392W PRE9P23638 258 aaKnown RBP5.48□□□□□ -1.53
SPT3YDR392W SWC3P31376 625 aa5.48□□□□□ -1.53
SPT3YDR392W YJL070CP40361 888 aa5.48□□□□□ -1.53
SPT3YDR392W IES1P43579 692 aa5.48□□□□□ -1.53
SPT3YDR392W NUP84P52891 726 aa5.48□□□□□ -1.53
SPT3YDR392W YGL081WP53156 320 aa5.48□□□□□ -1.53
SPT3YDR392W PBP1P53297 722 aaKnown RBP5.48□□□□□ -1.53
SPT3YDR392W PLB2Q03674 706 aa5.48□□□□□ -1.53
SPT3YDR392W RPN7Q06103 429 aaKnown RBP5.48□□□□□ -1.53
SPT3YDR392W RXT3Q07458 294 aa5.48□□□□□ -1.53
SPT3YDR392W HIF1Q12373 385 aa5.48□□□□□ -1.53
SPT3YDR392W TRM2P33753 639 aa5.47□□□□□ -1.53
SPT3YDR392W MPE1P35728 441 aaKnown RBP5.47□□□□□ -1.53
SPT3YDR392W HEL1P36113 551 aa5.47□□□□□ -1.53
SPT3YDR392W YGL260WP53056 76 aa5.47□□□□□ -1.53
SPT3YDR392W RRP46P53256 223 aaPredicted RBP5.47□□□□□ -1.53
SPT3YDR392W YGR122WP53272 402 aa5.47□□□□□ -1.53
SPT3YDR392W MOT3P54785 490 aaKnown RBP5.47□□□□□ -1.53
SPT3YDR392W ADA2Q02336 434 aa5.47□□□□□ -1.53
SPT3YDR392W ESC2Q06340 456 aa5.47□□□□□ -1.53
SPT3YDR392W SUE1Q06524 206 aa5.47□□□□□ -1.53
SPT3YDR392W HFI1Q12060 488 aa5.47□□□□□ -1.53
SPT3YDR392W LCB4Q12246 624 aa5.47□□□□□ -1.53
SPT3YDR392W KIN2P13186 1147 aaKnown RBP5.46□□□□□ -1.54
SPT3YDR392W RGD1P38339 666 aa5.46□□□□□ -1.54
SPT3YDR392W NDT80P38830 627 aa5.46□□□□□ -1.54
SPT3YDR392W RTS1P38903 757 aa5.46□□□□□ -1.54
SPT3YDR392W OSW5P40219 148 aa5.46□□□□□ -1.54
SPT3YDR392W MNN10P50108 393 aaKnown RBP5.46□□□□□ -1.54
SPT3YDR392W FOL1P53848 824 aa5.46□□□□□ -1.54
SPT3YDR392W SIW14P53965 281 aa5.46□□□□□ -1.54
SPT3YDR392W VPS30Q02948 557 aa5.46□□□□□ -1.54
SPT3YDR392W RCR2Q03446 210 aaKnown RBP5.46□□□□□ -1.54
SPT3YDR392W SVF1Q05515 481 aa5.46□□□□□ -1.54
SPT3YDR392W YDR061WQ12298 539 aa5.46□□□□□ -1.54
SPT3YDR392W GAL10P04397 699 aa5.45□□□□□ -1.54
SPT3YDR392W CMP2P14747 604 aa5.45□□□□□ -1.54
SPT3YDR392W MKK2P32491 506 aa5.45□□□□□ -1.54
SPT3YDR392W ROD1Q02805 837 aa5.45□□□□□ -1.54
SPT3YDR392W SRT1Q03175 343 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 120.5 ms