RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 BCAMP50895 628 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 GPSM2P81274 684 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 SLFNL1Q499Z3 407 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 FBXW7Q969H0 707 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 RILPL2Q969X0 211 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 RGPD3A6NKT7 1758 aaPredicted RBP14.24□□□□□ -0.13
SRRT-216ENST00000618262 RGPD4Q7Z3J3 1758 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 IL15P40933 162 aaPredicted RBP14.24□□□□□ -0.13
SRRT-216ENST00000618262 MFAP1P55081 439 aaKnown RBP14.24□□□□□ -0.13
SRRT-216ENST00000618262 CRY2Q49AN0 593 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 MASTLQ96GX5 879 aa14.24□□□□□ -0.13
SRRT-216ENST00000618262 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
SRRT-216ENST00000618262 C1QTNF12Q5T7M4 302 aa14.23□□□□□ -0.13
SRRT-216ENST00000618262 SGIP1Q9BQI5 828 aa14.23□□□□□ -0.13
SRRT-216ENST00000618262 KDM4CQ9H3R0 1056 aa14.23□□□□□ -0.13
SRRT-216ENST00000618262 PDE8BO95263 885 aa14.23□□□□□ -0.13
SRRT-216ENST00000618262 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
SRRT-216ENST00000618262 UFL1O94874 794 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 NPR1P16066 1061 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 KCNA3P22001 575 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 CALRP27797 417 aaKnown RBP14.22□□□□□ -0.13
SRRT-216ENST00000618262 BECN1Q14457 450 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 ZRSR2Q15696 482 aaKnown RBP14.22□□□□□ -0.13
SRRT-216ENST00000618262 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 CTR9Q6PD62 1173 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 XAGE2Q96GT9 111 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 SCARF1Q14162 830 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 PLEKHM2Q8IWE5 1019 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 NBPF3Q9H094 633 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 RPS6KL1Q9Y6S9 549 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 KIF1CO43896 1103 aaKnown RBP14.22□□□□□ -0.13
SRRT-216ENST00000618262 MX1P20591 662 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 LRCH2Q5VUJ6 765 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 TBC1D9Q6ZT07 1266 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 VPS37DQ86XT2 251 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 EVI5LQ96CN4 794 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
SRRT-216ENST00000618262 PHKA1P46020 1223 aa14.21□□□□□ -0.13
SRRT-216ENST00000618262 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.13
SRRT-216ENST00000618262 POLLQ9UGP5 575 aa14.21□□□□□ -0.13
SRRT-216ENST00000618262 SPEF2Q9C093 1822 aa14.21□□□□□ -0.13
SRRT-216ENST00000618262 FAM210AQ96ND0 272 aa14.21□□□□□ -0.14
SRRT-216ENST00000618262 FEZ2Q9UHY8 353 aaPredicted RBP14.21□□□□□ -0.14
SRRT-216ENST00000618262 PCNTO95613 3336 aa14.21□□□□□ -0.14
SRRT-216ENST00000618262 RAB11FIP3O75154 756 aa14.2□□□□□ -0.14
SRRT-216ENST00000618262 CHAF1AQ13111 956 aaPredicted RBP14.2□□□□□ -0.14
SRRT-216ENST00000618262 ZNF280DQ6N043 979 aa14.2□□□□□ -0.14
SRRT-216ENST00000618262 TTLL6Q8N841 843 aa14.2□□□□□ -0.14
SRRT-216ENST00000618262 PDE1AP54750 535 aa14.2□□□□□ -0.14
SRRT-216ENST00000618262 KCNQ5Q9NR82 932 aa14.2□□□□□ -0.14
SRRT-216ENST00000618262 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
SRRT-216ENST00000618262 DPP8Q6V1X1 898 aaPredicted RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 ERC1Q8IUD2 1116 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 SYT17Q9BSW7 474 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 ANTXR1Q9H6X2 564 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 DBNDD1Q9H9R9 158 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 ZNF277Q9NRM2 450 aaPredicted RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 RBM5P52756 815 aaKnown RBP eCLIP14.19□□□□□ -0.14
SRRT-216ENST00000618262 WASHC4Q2M389 1173 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 VGLL2Q8N8G2 317 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 GZF1Q9H116 711 aaPredicted RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 STK24Q9Y6E0 443 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 N4BP2Q86UW6 1770 aaPredicted RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 GSPT1P15170 499 aaKnown RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 SF3A1Q15459 793 aaKnown RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 MXD3Q9BW11 206 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 TMX4Q9H1E5 349 aaPredicted RBP14.19□□□□□ -0.14
SRRT-216ENST00000618262 BRMS1Q9HCU9 246 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 PIM2Q9P1W9 311 aa14.19□□□□□ -0.14
SRRT-216ENST00000618262 ZNF804BA4D1E1 1349 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 COL24A1Q17RW2 1714 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 RHBDL3P58872 404 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 PUM3Q15397 648 aaKnown RBP14.18□□□□□ -0.14
SRRT-216ENST00000618262 TTC39AQ5SRH9 613 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 SMC3Q9UQE7 1217 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 ANKRD31Q8N7Z5 1873 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 PAX7P23759 505 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 NOP2P46087 812 aaKnown RBP14.18□□□□□ -0.14
SRRT-216ENST00000618262 CCDC173Q0VFZ6 552 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 CACNA1SQ13698 1873 aa14.18□□□□□ -0.14
SRRT-216ENST00000618262 MROH5Q6ZUA9 1318 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 MYH3P11055 1940 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 G3V3G9 751 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 RGL2O15211 777 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 BBOX1O75936 387 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 HOXA10P31260 410 aaPredicted RBP14.17□□□□□ -0.14
SRRT-216ENST00000618262 AOC3Q16853 763 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 CCDC102BQ68D86 513 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 ACRBPQ8NEB7 543 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 MKL1Q969V6 931 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
SRRT-216ENST00000618262 CIAO1O76071 339 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 RASSF7Q02833 373 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 DALRD3Q5D0E6 543 aaKnown RBP14.17□□□□□ -0.14
SRRT-216ENST00000618262 ABCF2Q9UG63 623 aa14.17□□□□□ -0.14
SRRT-216ENST00000618262 NUB1Q9Y5A7 615 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms