RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 GNL3LQ9NVN8 582 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 BRPF3Q9ULD4 1205 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 ZNF804BA4D1E1 1349 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 CARMIL3Q8ND23 1372 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 C6orf229H3BNL8 230 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 DNM1Q05193 864 aaKnown RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 EN1Q05925 392 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 UBE4AQ14139 1066 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 UBE3CQ15386 1083 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 POTEAQ6S8J7 498 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 IFNL3Q8IZI9 196 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 IL17RAQ96F46 866 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 SH2B1Q9NRF2 756 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 AATFQ9NY61 560 aaKnown RBP eCLIP4.06□□□□□ -1.76
LIG4-205ENST00000614526 CTNNA3Q9UI47 895 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 WDR33Q9C0J8 1336 aaKnown RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 KLF18A0A0U1RQI7 1052 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ZSCAN22P10073 491 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 TRDNQ13061 729 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ANKRD1Q15327 319 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 GRIK5Q16478 980 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 TSGA10IPQ3SY00 556 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ZNF772Q68DY9 489 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 NAA16Q6N069 864 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 CYB5R4Q7L1T6 521 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 USP48Q86UV5 1035 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 GAS2L3Q86XJ1 694 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 FAM184AQ8NB25 1140 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 GPT2Q8TD30 523 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 PDGFDQ9GZP0 370 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 NBPF3Q9H094 633 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 GSG1L2A8MUP6 293 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 F8W031 263 aaPredicted RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 H3BQV1 296 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 UFL1O94874 794 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 MMP10P09238 476 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ANTXR2P58335 489 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ST5P78524 1137 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 GPSM2P81274 684 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 EXOSC10Q01780 885 aaKnown RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 DIXDC1Q155Q3 683 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 IFFO2Q5TF58 517 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 NFXL1Q6ZNB6 911 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 CMTR1Q8N1G2 835 aaKnown RBP4.06□□□□□ -1.76
LIG4-205ENST00000614526 NCOA7Q8NI08 942 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ZNF384Q8TF68 577 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 ZNF622Q969S3 477 aaKnown RBP eCLIP4.06□□□□□ -1.76
LIG4-205ENST00000614526 PANK2Q9BZ23 570 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 MTMR6Q9Y217 621 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 TACC3Q9Y6A5 838 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 NEDD4P46934 1319 aa4.06□□□□□ -1.76
LIG4-205ENST00000614526 MAGEB6P1A0A0J9YX57 407 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 GOLGA8BA8MQT2 603 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 PATL2C9JE40 543 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 F13A1P00488 732 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 PDIA3P30101 505 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 MCM5P33992 734 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 ADD1P35611 737 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 MECOMQ03112 1051 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 GRAPQ13588 217 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 EZH2Q15910 746 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 SLC27A3Q5K4L6 730 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 DEFB132Q7Z7B7 95 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 MICU3Q86XE3 530 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 GRAPLQ8TC17 118 aaPredicted RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 GTF3C6Q969F1 213 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 ZNF512BQ96KM6 892 aaPredicted RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 RTN4Q9NQC3 1192 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 RGS17Q9UGC6 210 aaPredicted RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 MTMR7Q9Y216 660 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 GOLGA6L3A6NEY3 463 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 UBE2Q2LH0YL09 131 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 POLRMTO00411 1230 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 FBXO33Q7Z6M2 555 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 ANKRD2Q9GZV1 360 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 RFX7Q2KHR2 1363 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 ANKRD36CQ5JPF3 1778 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 MYO5AQ9Y4I1 1855 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 THSD7AQ9UPZ6 1657 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 PTPDC1A2A3K4 754 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 CPLX1O14810 134 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 IFIT3O14879 490 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 CTDNEP1O95476 244 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 HMGB1P09429 215 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 CYP2D6P10635 497 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 DOK7Q18PE1 504 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 DZIP1Q86YF9 867 aaKnown RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 MB21D2Q8IYB1 491 aaPredicted RBP4.05□□□□□ -1.76
LIG4-205ENST00000614526 PHKBQ93100 1093 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 AIFM3Q96NN9 605 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 MXD3Q9BW11 206 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 FTOQ9C0B1 505 aaKnown RBP eCLIP4.05□□□□□ -1.76
LIG4-205ENST00000614526 ZSWIM5Q9P217 1185 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 MYH3P11055 1940 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 RTL9Q8NET4 1388 aa4.05□□□□□ -1.76
LIG4-205ENST00000614526 COL1A1P02452 1464 aaPredicted RBP4.04□□□□□ -1.76
LIG4-205ENST00000614526 SYCE3A1L190 88 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 USP17L12C9JPN9 530 aa4.04□□□□□ -1.76
LIG4-205ENST00000614526 USP17L21D6R901 530 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms