RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 MMP14P50281 582 aa13.96□□□□□ -0.18
LIG1-207ENST00000594759 TAX1BP1Q86VP1 789 aa13.96□□□□□ -0.18
LIG1-207ENST00000594759 EVI5LQ96CN4 794 aa13.96□□□□□ -0.18
LIG1-207ENST00000594759 GOLGA6L10A0A0M3HER8 536 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 SPTLC2O15270 562 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 FCHSD1Q86WN1 690 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 FUCA2Q9BTY2 467 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 KIAA1468Q9P260 1216 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 SYNMO15061 1565 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 JAK2O60674 1132 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 KIF5BP33176 963 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 NFXL1Q6ZNB6 911 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 SSH2Q76I76 1423 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 PLEKHG2Q9H7P9 1386 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 CABP4P57796 275 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 GOLGA8FQ08AF8 430 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 GOLGA8DPQ0D2H9 430 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 MTHFSDQ2M296 383 aaKnown RBP13.95□□□□□ -0.18
LIG1-207ENST00000594759 CPLX4Q7Z7G2 160 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 OSBPL5Q9H0X9 879 aaPredicted RBP13.95□□□□□ -0.18
LIG1-207ENST00000594759 TSPOAP1O95153 1857 aa13.95□□□□□ -0.18
LIG1-207ENST00000594759 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 NLRP12P59046 1061 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
LIG1-207ENST00000594759 SND1Q7KZF4 910 aaKnown RBP eCLIP13.94□□□□□ -0.18
LIG1-207ENST00000594759 PNMA8AQ86V59 439 aaPredicted RBP13.94□□□□□ -0.18
LIG1-207ENST00000594759 ARFGAP2Q8N6H7 521 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 NUCKS1Q9H1E3 243 aaKnown RBP13.94□□□□□ -0.18
LIG1-207ENST00000594759 RIPOR2Q9Y4F9 1068 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 KIF3CO14782 793 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
LIG1-207ENST00000594759 ACTN3Q08043 901 aaPredicted RBP13.94□□□□□ -0.18
LIG1-207ENST00000594759 HLTFQ14527 1009 aaKnown RBP eCLIP13.94□□□□□ -0.18
LIG1-207ENST00000594759 CFAP58Q5T655 872 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 EYA1Q99502 592 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 OSBPL3Q9H4L5 887 aa13.94□□□□□ -0.18
LIG1-207ENST00000594759 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
LIG1-207ENST00000594759 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
LIG1-207ENST00000594759 ADCK5Q3MIX3 580 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
LIG1-207ENST00000594759 TEX11Q8IYF3 940 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 MAGEC2Q9UBF1 373 aaPredicted RBP13.93□□□□□ -0.18
LIG1-207ENST00000594759 TPCN1Q9ULQ1 816 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 ADCY10Q96PN6 1610 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 SCP2P22307 547 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 ATP1A2P50993 1020 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 ENOX2Q16206 610 aaKnown RBP13.93□□□□□ -0.18
LIG1-207ENST00000594759 Q6ZUG5 572 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 RPUSD2Q8IZ73 545 aaKnown RBP13.93□□□□□ -0.18
LIG1-207ENST00000594759 HMG20BQ9P0W2 317 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 WHAMMP3Q1A5X7 153 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 ATL3Q6DD88 541 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 EHBP1Q8NDI1 1231 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 SAAL1Q96ER3 474 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 METP08581 1390 aa13.93□□□□□ -0.18
LIG1-207ENST00000594759 N4BP3O15049 544 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 IFT88Q13099 833 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 SPA17Q15506 151 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 SH3GL3Q99963 347 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 STX10O60499 249 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 PSEN1P49768 467 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 PTPN21Q16825 1174 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 TTF2Q9UNY4 1162 aaKnown RBP13.92□□□□□ -0.18
LIG1-207ENST00000594759 MLH3Q9UHC1 1453 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
LIG1-207ENST00000594759 ZRANB2O95218 330 aaKnown RBP eCLIP13.92□□□□□ -0.18
LIG1-207ENST00000594759 FKBP15Q5T1M5 1219 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 NAIF1Q69YI7 327 aaPredicted RBP13.92□□□□□ -0.18
LIG1-207ENST00000594759 TBC1D31Q96DN5 1066 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 CCDC85AQ96PX6 553 aaPredicted RBP13.92□□□□□ -0.18
LIG1-207ENST00000594759 ORAI2Q96SN7 254 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 TRPM1Q7Z4N2 1603 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 SPECC1LQ69YQ0 1117 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 LRRN4CLQ8ND94 238 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 TM6SF1Q9BZW5 370 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 TBX22Q9Y458 520 aa13.92□□□□□ -0.18
LIG1-207ENST00000594759 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
LIG1-207ENST00000594759 FAM135BQ49AJ0 1406 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 TRPM2O94759 1503 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 TMCO5BA8MYB1 307 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 HMGB1P09429 215 aaKnown RBP13.91□□□□□ -0.18
LIG1-207ENST00000594759 HPDP32754 393 aaPredicted RBP13.91□□□□□ -0.18
LIG1-207ENST00000594759 VAV2P52735 878 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 PTH1RQ03431 593 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 NMIQ13287 307 aaPredicted RBP13.91□□□□□ -0.18
LIG1-207ENST00000594759 ZRSR2Q15696 482 aaKnown RBP13.91□□□□□ -0.18
LIG1-207ENST00000594759 DPCR1Q3MIW9 517 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 SWT1Q5T5J6 900 aaKnown RBP13.91□□□□□ -0.18
LIG1-207ENST00000594759 FOXR1Q6PIV2 292 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 E7EVH7 732 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 ZNF202O95125 648 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 DNA2P51530 1060 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 LRRC31Q6UY01 552 aa13.91□□□□□ -0.18
LIG1-207ENST00000594759 SOS1Q07889 1333 aaPredicted RBP13.91□□□□□ -0.18
LIG1-207ENST00000594759 PPARDQ03181 441 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms