RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CLMNQ96JQ2 1002 aa11.13□□□□□ -0.63
SMAD4-215ENST00000592911 PTPN18Q99952 460 aa11.13□□□□□ -0.63
SMAD4-215ENST00000592911 MXD3Q9BW11 206 aa11.13□□□□□ -0.63
SMAD4-215ENST00000592911 STK31Q9BXU1 1019 aa11.13□□□□□ -0.63
SMAD4-215ENST00000592911 FAM205AQ6ZU69 1335 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 PI4KAP2A4QPH2 592 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 MAP3K13O43283 966 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 TLR2O60603 784 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 TNNI2P48788 182 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 RASA3Q14644 834 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 TAF1CQ15572 869 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-215ENST00000592911 SLC4A8Q2Y0W8 1093 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 PI4KAP1Q8N8J0 262 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 ZNF428Q96B54 188 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-215ENST00000592911 OPTNQ96CV9 577 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-215ENST00000592911 CSADQ9Y600 493 aa11.12□□□□□ -0.63
SMAD4-215ENST00000592911 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 HOXD10P28358 340 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 GJA5P36382 358 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 HDLBPQ00341 1268 aaKnown RBP11.11□□□□□ -0.63
SMAD4-215ENST00000592911 CHRNDQ07001 517 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 GCKRQ14397 625 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 NBPF12Q5TAG4 269 aaPredicted RBP11.11□□□□□ -0.63
SMAD4-215ENST00000592911 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 CERS5Q8N5B7 392 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 PRMT6Q96LA8 375 aaPredicted RBP11.11□□□□□ -0.63
SMAD4-215ENST00000592911 HTATIP2Q9BUP3 242 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 PTCH2Q9Y6C5 1203 aa11.11□□□□□ -0.63
SMAD4-215ENST00000592911 CETPP11597 493 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 CASP7P55210 303 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 LACTBP83111 547 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-215ENST00000592911 FKBP1CQ5VVH2 108 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 UBE3BQ7Z3V4 1068 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 LINS1Q8NG48 757 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMAD4-215ENST00000592911 BRI3BPQ8WY22 251 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
SMAD4-215ENST00000592911 RPAP1Q9BWH6 1393 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-215ENST00000592911 CCL15-CCL14A0A0B4J2E2 113 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 WTIPA6NIX2 430 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-215ENST00000592911 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 H0YGN5 161 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 IFIT5Q13325 482 aaKnown RBP11.09□□□□□ -0.63
SMAD4-215ENST00000592911 CCL15Q16663 113 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 GPR153Q6NV75 609 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.09□□□□□ -0.63
SMAD4-215ENST00000592911 ERO1BQ86YB8 467 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 TEPSINQ96N21 525 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 NR2E3Q9Y5X4 410 aa11.09□□□□□ -0.63
SMAD4-215ENST00000592911 MGAMO43451 1857 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 KLRK1P26718 216 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 SNAPC2Q13487 334 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 VGLL4Q14135 290 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 UBE4AQ14139 1066 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 UBE2Q1Q7Z7E8 422 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 FAM83AQ86UY5 434 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 C8orf58Q8NAV2 365 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 TBC1D22AQ8WUA7 517 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 PRO3102Q9H379 93 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 ELP3Q9H9T3 547 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 ZNF70Q9UC06 446 aaPredicted RBP11.08□□□□□ -0.64
SMAD4-215ENST00000592911 SUGT1Q9Y2Z0 365 aa11.08□□□□□ -0.64
SMAD4-215ENST00000592911 LAMA3Q16787 3333 aa11.07□□□□□ -0.64
SMAD4-215ENST00000592911 CLRN2A0PK11 232 aa11.07□□□□□ -0.64
SMAD4-215ENST00000592911 GJB1P08034 283 aa11.07□□□□□ -0.64
SMAD4-215ENST00000592911 GJA8P48165 433 aa11.07□□□□□ -0.64
SMAD4-215ENST00000592911 PPIL2Q13356 520 aa11.07□□□□□ -0.64
SMAD4-215ENST00000592911 CCDC27Q2M243 656 aa11.07□□□□□ -0.64
SMAD4-215ENST00000592911 CWF19L2Q2TBE0 894 aaKnown RBP11.07□□□□□ -0.64
SMAD4-215ENST00000592911 JARID2Q92833 1246 aaPredicted RBP11.07□□□□□ -0.64
SMAD4-215ENST00000592911 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
SMAD4-215ENST00000592911 ELL2O00472 640 aaPredicted RBP11.06□□□□□ -0.64
SMAD4-215ENST00000592911 RBM5P52756 815 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMAD4-215ENST00000592911 CAP1Q01518 475 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 PPATQ06203 517 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 DCAF15Q66K64 600 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 DZIP1LQ8IYY4 767 aaKnown RBP11.06□□□□□ -0.64
SMAD4-215ENST00000592911 FAM43AQ8N2R8 423 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 TDRD7Q8NHU6 1098 aaKnown RBP11.06□□□□□ -0.64
SMAD4-215ENST00000592911 DNAAF4Q8WXU2 420 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 SRRDQ9UH36 339 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
SMAD4-215ENST00000592911 FZD1Q9UP38 647 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 MAST3O60307 1309 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 IL16Q14005 1332 aa11.06□□□□□ -0.64
SMAD4-215ENST00000592911 COL6A3P12111 3177 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 A0A0C4DFX4 3053 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 UBXN2AP68543 259 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 FLIIQ13045 1269 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 C17orf99Q6UX52 265 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms