RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 EFCC1Q9HA90 598 aa18.81■□□□□ 0.6
ERCC1-214ENST00000592083 MROH5Q6ZUA9 1318 aa18.8■□□□□ 0.6
ERCC1-214ENST00000592083 HNRNPUQ00839 825 aaKnown RBP eCLIP18.8■□□□□ 0.6
ERCC1-214ENST00000592083 UBE4AQ14139 1066 aa18.8■□□□□ 0.6
ERCC1-214ENST00000592083 METTL24Q5JXM2 366 aa18.8■□□□□ 0.6
ERCC1-214ENST00000592083 RBBP6Q7Z6E9 1792 aaKnown RBP18.79■□□□□ 0.6
ERCC1-214ENST00000592083 SP3Q02447 781 aa18.79■□□□□ 0.6
ERCC1-214ENST00000592083 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
ERCC1-214ENST00000592083 ARMC5Q96C12 935 aa18.79■□□□□ 0.6
ERCC1-214ENST00000592083 FAM84BQ96KN1 310 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-214ENST00000592083 COLQQ9Y215 455 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-214ENST00000592083 UBTFL1P0CB47 393 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-214ENST00000592083 HIBADHP31937 336 aaKnown RBP18.78■□□□□ 0.6
ERCC1-214ENST00000592083 SUPT20HL1Q3ZLR7 823 aa18.78■□□□□ 0.6
ERCC1-214ENST00000592083 MTMR14Q8NCE2 650 aa18.78■□□□□ 0.6
ERCC1-214ENST00000592083 VEZTQ9HBM0 779 aa18.78■□□□□ 0.6
ERCC1-214ENST00000592083 BRCA2P51587 3418 aa18.77■□□□□ 0.6
ERCC1-214ENST00000592083 ECM29Q5VYK3 1845 aa18.77■□□□□ 0.6
ERCC1-214ENST00000592083 BCAR3O75815 825 aa18.77■□□□□ 0.6
ERCC1-214ENST00000592083 RFX5P48382 616 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-214ENST00000592083 OTUD7BQ6GQQ9 843 aa18.77■□□□□ 0.6
ERCC1-214ENST00000592083 TDRD7Q8NHU6 1098 aaKnown RBP18.77■□□□□ 0.6
ERCC1-214ENST00000592083 IQSEC3Q9UPP2 1182 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-214ENST00000592083 LAMB1P07942 1786 aa18.76■□□□□ 0.59
ERCC1-214ENST00000592083 PDE8BO95263 885 aa18.76■□□□□ 0.59
ERCC1-214ENST00000592083 MYCP01106 439 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-214ENST00000592083 IREB2P48200 963 aaKnown RBP18.76■□□□□ 0.59
ERCC1-214ENST00000592083 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
ERCC1-214ENST00000592083 TMEM106CQ9BVX2 250 aa18.76■□□□□ 0.59
ERCC1-214ENST00000592083 ELP3Q9H9T3 547 aa18.76■□□□□ 0.59
ERCC1-214ENST00000592083 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
ERCC1-214ENST00000592083 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
ERCC1-214ENST00000592083 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-214ENST00000592083 SPDYE2BA6NHP3 402 aa18.75■□□□□ 0.59
ERCC1-214ENST00000592083 SPDYE6P0CI01 402 aa18.75■□□□□ 0.59
ERCC1-214ENST00000592083 RBM5P52756 815 aaKnown RBP eCLIP18.75■□□□□ 0.59
ERCC1-214ENST00000592083 RASA3Q14644 834 aa18.75■□□□□ 0.59
ERCC1-214ENST00000592083 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
ERCC1-214ENST00000592083 FRAT1Q92837 279 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-214ENST00000592083 MEIS3Q99687 375 aa18.75■□□□□ 0.59
ERCC1-214ENST00000592083 PPP2R3BQ9Y5P8 575 aa18.75■□□□□ 0.59
ERCC1-214ENST00000592083 COL1A1P02452 1464 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-214ENST00000592083 FAM205AQ6ZU69 1335 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 UNCXA6NJT0 531 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 EYA2O00167 538 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 MYO1BO43795 1136 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 FKBP1AP62942 108 aaKnown RBP18.74■□□□□ 0.59
ERCC1-214ENST00000592083 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 VPS37DQ86XT2 251 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 ANKRD13AQ8IZ07 590 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 ARHGAP45Q92619 1136 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 ZNF333Q96JL9 665 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 MS4A4AQ96JQ5 239 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 SIL1Q9H173 461 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 PTCH2Q9Y6C5 1203 aa18.74■□□□□ 0.59
ERCC1-214ENST00000592083 BCAMP50895 628 aa18.73■□□□□ 0.59
ERCC1-214ENST00000592083 CHAF1AQ13111 956 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-214ENST00000592083 MFSD14BQ5SR56 506 aa18.73■□□□□ 0.59
ERCC1-214ENST00000592083 CAVIN4Q5BKX8 364 aa18.72■□□□□ 0.59
ERCC1-214ENST00000592083 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
ERCC1-214ENST00000592083 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
ERCC1-214ENST00000592083 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
ERCC1-214ENST00000592083 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
ERCC1-214ENST00000592083 FRAT2O75474 233 aaPredicted RBP18.71■□□□□ 0.59
ERCC1-214ENST00000592083 TRIM27P14373 513 aa18.71■□□□□ 0.59
ERCC1-214ENST00000592083 FGFR2P21802 821 aa18.71■□□□□ 0.59
ERCC1-214ENST00000592083 PUM3Q15397 648 aaKnown RBP18.71■□□□□ 0.59
ERCC1-214ENST00000592083 GRIK5Q16478 980 aa18.71■□□□□ 0.59
ERCC1-214ENST00000592083 SLC4A8Q2Y0W8 1093 aa18.71■□□□□ 0.59
ERCC1-214ENST00000592083 BRI3BPQ8WY22 251 aa18.71■□□□□ 0.59
ERCC1-214ENST00000592083 TDRD3Q9H7E2 651 aaKnown RBP18.71■□□□□ 0.59
ERCC1-214ENST00000592083 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
ERCC1-214ENST00000592083 PA2G4Q9UQ80 394 aaKnown RBP18.71■□□□□ 0.59
ERCC1-214ENST00000592083 OTOFQ9HC10 1997 aa18.71■□□□□ 0.59
ERCC1-214ENST00000592083 H0YGN5 161 aa18.7■□□□□ 0.58
ERCC1-214ENST00000592083 TAF1CQ15572 869 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-214ENST00000592083 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
ERCC1-214ENST00000592083 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-214ENST00000592083 ZNF70Q9UC06 446 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-214ENST00000592083 ZSWIM8A7E2V4 1837 aa18.7■□□□□ 0.58
ERCC1-214ENST00000592083 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 ECM2O94769 699 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-214ENST00000592083 IFIT1P09914 478 aaKnown RBP18.69■□□□□ 0.58
ERCC1-214ENST00000592083 CCL15Q16663 113 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 ATF7IPQ6VMQ6 1270 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 NBPF11Q86T75 865 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 SH3TC2Q8TF17 1288 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 ARHGAP39Q9C0H5 1083 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 ZFYVE28Q9HCC9 887 aa18.69■□□□□ 0.58
ERCC1-214ENST00000592083 CEP290O15078 2479 aa18.68■□□□□ 0.58
ERCC1-214ENST00000592083 SLC5A1P13866 664 aa18.68■□□□□ 0.58
ERCC1-214ENST00000592083 OTUD5Q96G74 571 aa18.68■□□□□ 0.58
ERCC1-214ENST00000592083 TEPSINQ96N21 525 aa18.68■□□□□ 0.58
ERCC1-214ENST00000592083 HDAC5Q9UQL6 1122 aa18.68■□□□□ 0.58
ERCC1-214ENST00000592083 TCP10L2B9ZVM9 353 aa18.67■□□□□ 0.58
ERCC1-214ENST00000592083 CIAO1O76071 339 aa18.67■□□□□ 0.58
ERCC1-214ENST00000592083 GNAI3P08754 354 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms