RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 CHSY3Q70JA7 882 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 GGNBP2Q9H3C7 697 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 SPG7Q9UQ90 795 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 KIF24Q5T7B8 1368 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 LY75O60449 1722 aa7.69□□□□□ -1.18
DNMT1-220ENST00000589351 YBX3P16989 372 aaKnown RBP eCLIP7.68□□□□□ -1.18
DNMT1-220ENST00000589351 GATA4P43694 442 aa7.68□□□□□ -1.18
DNMT1-220ENST00000589351 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
DNMT1-220ENST00000589351 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
DNMT1-220ENST00000589351 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
DNMT1-220ENST00000589351 TESK2Q96S53 571 aa7.68□□□□□ -1.18
DNMT1-220ENST00000589351 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
DNMT1-220ENST00000589351 COL24A1Q17RW2 1714 aa7.68□□□□□ -1.18
DNMT1-220ENST00000589351 INSRP06213 1382 aa7.68□□□□□ -1.18
DNMT1-220ENST00000589351 DOT1LQ8TEK3 1739 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 GTF2E1P29083 439 aaPredicted RBP7.67□□□□□ -1.18
DNMT1-220ENST00000589351 HSP90AB2PQ58FF8 381 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 CRISPLD1Q9H336 500 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 KLF15Q9UIH9 416 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 NSD2O96028 1365 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 FLT4P35916 1363 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 PALLDQ8WX93 1383 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 MEGF6O75095 1541 aa7.67□□□□□ -1.18
DNMT1-220ENST00000589351 SCO2A0A1W2PP80 73 aa7.66□□□□□ -1.18
DNMT1-220ENST00000589351 PPM1GO15355 546 aaPredicted RBP7.66□□□□□ -1.18
DNMT1-220ENST00000589351 SSFA2P28290 1259 aa7.66□□□□□ -1.18
DNMT1-220ENST00000589351 NR1H3Q13133 447 aa7.66□□□□□ -1.18
DNMT1-220ENST00000589351 RSPO4Q2I0M5 234 aaPredicted RBP7.66□□□□□ -1.18
DNMT1-220ENST00000589351 TRIM11Q96F44 468 aa7.66□□□□□ -1.18
DNMT1-220ENST00000589351 DNAAF2Q9NVR5 837 aaKnown RBP7.66□□□□□ -1.18
DNMT1-220ENST00000589351 TMOD3Q9NYL9 352 aa7.66□□□□□ -1.18
DNMT1-220ENST00000589351 HCN2Q9UL51 889 aa7.66□□□□□ -1.18
DNMT1-220ENST00000589351 UTRNP46939 3433 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 CYP27B1O15528 508 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 RGPD2P0DJD1 1756 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 HSPA6P17066 643 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 IFNL2Q8IZJ0 200 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 IGSF1Q8N6C5 1336 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 ZNF526Q8TF50 670 aaPredicted RBP7.65□□□□□ -1.18
DNMT1-220ENST00000589351 PLVAPQ9BX97 442 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 ZCCHC2Q9C0B9 1178 aaKnown RBP7.65□□□□□ -1.18
DNMT1-220ENST00000589351 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 ATP10DQ9P241 1426 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 PCDHGC4Q9Y5F7 938 aa7.65□□□□□ -1.18
DNMT1-220ENST00000589351 TUBGCP6Q96RT7 1819 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 LOC102724428A0A0B4J2F2 783 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 EIF5BO60841 1220 aaKnown RBP7.64□□□□□ -1.19
DNMT1-220ENST00000589351 SIK1P57059 783 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 TMEM259Q4ZIN3 620 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 NKAPLQ5M9Q1 402 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 FCHSD1Q86WN1 690 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 NLGN1Q8N2Q7 840 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 PIGBQ92521 554 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 CCDC85AQ96PX6 553 aaPredicted RBP7.64□□□□□ -1.19
DNMT1-220ENST00000589351 C1orf115Q9H7X2 142 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 SHANK3Q9BYB0 1731 aa7.64□□□□□ -1.19
DNMT1-220ENST00000589351 C5P01031 1676 aa7.63□□□□□ -1.19
DNMT1-220ENST00000589351 STAU1O95793 577 aaKnown RBP7.63□□□□□ -1.19
DNMT1-220ENST00000589351 MYCP01106 439 aaPredicted RBP7.63□□□□□ -1.19
DNMT1-220ENST00000589351 HSP90AB1P08238 724 aaKnown RBP7.63□□□□□ -1.19
DNMT1-220ENST00000589351 ADH6P28332 368 aa7.63□□□□□ -1.19
DNMT1-220ENST00000589351 TGFB2P61812 414 aa7.63□□□□□ -1.19
DNMT1-220ENST00000589351 TRAPPC3LQ5T215 181 aa7.63□□□□□ -1.19
DNMT1-220ENST00000589351 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
DNMT1-220ENST00000589351 RTCBQ9Y3I0 505 aaKnown RBP7.63□□□□□ -1.19
DNMT1-220ENST00000589351 WASHC2AQ641Q2 1341 aa7.62□□□□□ -1.19
DNMT1-220ENST00000589351 TOMM70O94826 608 aa7.62□□□□□ -1.19
DNMT1-220ENST00000589351 SPATA31C1P0DKV0 1188 aa7.62□□□□□ -1.19
DNMT1-220ENST00000589351 CCDC87Q9NVE4 849 aa7.62□□□□□ -1.19
DNMT1-220ENST00000589351 TAF1LQ8IZX4 1826 aa7.62□□□□□ -1.19
DNMT1-220ENST00000589351 C4BP0C0L5 1744 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ERVV-2B6SEH9 535 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ATXN7O15265 892 aaPredicted RBP7.61□□□□□ -1.19
DNMT1-220ENST00000589351 PHKG2P15735 406 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 CD33P20138 364 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 RFC4P35249 363 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 PLEKHO1Q53GL0 409 aaPredicted RBP7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ARTNQ5T4W7 220 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ARHGAP27Q6ZUM4 889 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 C16orf71Q8IYS4 520 aaPredicted RBP7.61□□□□□ -1.19
DNMT1-220ENST00000589351 LINC00116Q8NCU8 138 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 TPSG1Q9NRR2 321 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ASAP1Q9ULH1 1129 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 BCS1LQ9Y276 419 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ZNF330Q9Y3S2 320 aaPredicted RBP7.61□□□□□ -1.19
DNMT1-220ENST00000589351 PARP3Q9Y6F1 533 aa7.61□□□□□ -1.19
DNMT1-220ENST00000589351 ITGB4P16144 1822 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 MMP10P09238 476 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 MAPTP10636 758 aaKnown RBP7.6□□□□□ -1.19
DNMT1-220ENST00000589351 ATP4AP20648 1035 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 PLA2G4AP47712 749 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 TNP2Q05952 138 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 TBC1D9Q6ZT07 1266 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 ETNK1Q9HBU6 452 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 ZFP64Q9NPA5 681 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 CEP126Q9P2H0 1117 aa7.6□□□□□ -1.19
DNMT1-220ENST00000589351 WWC3Q9ULE0 1092 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms