RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 SUGT1Q9Y2Z0 365 aa28.5■■■□□ 2.15
CDKN2A-212ENST00000578845 SLC5A1P13866 664 aa28.49■■■□□ 2.15
CDKN2A-212ENST00000578845 DGKZQ13574 1117 aa28.49■■■□□ 2.15
CDKN2A-212ENST00000578845 NBPF12Q5TAG4 269 aaPredicted RBP28.49■■■□□ 2.15
CDKN2A-212ENST00000578845 SPRYD7Q5W111 196 aa28.49■■■□□ 2.15
CDKN2A-212ENST00000578845 TDRD3Q9H7E2 651 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-212ENST00000578845 LRRFIP2Q9Y608 721 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-212ENST00000578845 SREBF2Q12772 1141 aa28.48■■■□□ 2.15
CDKN2A-212ENST00000578845 MEIS3Q99687 375 aa28.48■■■□□ 2.15
CDKN2A-212ENST00000578845 LAMB1P07942 1786 aa28.47■■■□□ 2.15
CDKN2A-212ENST00000578845 ZBTB48P10074 688 aaPredicted RBP28.46■■■□□ 2.15
CDKN2A-212ENST00000578845 TEKT1Q969V4 418 aa28.46■■■□□ 2.15
CDKN2A-212ENST00000578845 TEPSINQ96N21 525 aa28.46■■■□□ 2.15
CDKN2A-212ENST00000578845 CFHR5Q9BXR6 569 aa28.46■■■□□ 2.15
CDKN2A-212ENST00000578845 COPRSQ9NQ92 184 aa28.46■■■□□ 2.15
CDKN2A-212ENST00000578845 MAST3O60307 1309 aa28.45■■■□□ 2.15
CDKN2A-212ENST00000578845 IL15P40933 162 aaPredicted RBP28.45■■■□□ 2.14
CDKN2A-212ENST00000578845 IREB2P48200 963 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-212ENST00000578845 MKRN3Q13064 507 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-212ENST00000578845 NOM1Q5C9Z4 860 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-212ENST00000578845 SLC10A4Q96EP9 437 aa28.45■■■□□ 2.14
CDKN2A-212ENST00000578845 ZDHHC15Q96MV8 337 aa28.45■■■□□ 2.14
CDKN2A-212ENST00000578845 SIL1Q9H173 461 aa28.45■■■□□ 2.14
CDKN2A-212ENST00000578845 ZBTB22O15209 634 aa28.44■■■□□ 2.14
CDKN2A-212ENST00000578845 USP2O75604 605 aaPredicted RBP28.44■■■□□ 2.14
CDKN2A-212ENST00000578845 CLMNQ96JQ2 1002 aa28.44■■■□□ 2.14
CDKN2A-212ENST00000578845 CEP126Q9P2H0 1117 aa28.44■■■□□ 2.14
CDKN2A-212ENST00000578845 GNAI3P08754 354 aa28.43■■■□□ 2.14
CDKN2A-212ENST00000578845 MTX1Q13505 466 aa28.43■■■□□ 2.14
CDKN2A-212ENST00000578845 ATP2B3Q16720 1220 aa28.43■■■□□ 2.14
CDKN2A-212ENST00000578845 WDR66Q8TBY9 1149 aa28.43■■■□□ 2.14
CDKN2A-212ENST00000578845 WNK4Q96J92 1243 aa28.43■■■□□ 2.14
CDKN2A-212ENST00000578845 MANSC4A6NHS7 340 aaPredicted RBP28.42■■■□□ 2.14
CDKN2A-212ENST00000578845 CCDC85CA6NKD9 419 aa28.42■■■□□ 2.14
CDKN2A-212ENST00000578845 IPO8O15397 1037 aaKnown RBP28.42■■■□□ 2.14
CDKN2A-212ENST00000578845 TRIM27P14373 513 aa28.42■■■□□ 2.14
CDKN2A-212ENST00000578845 TNNI2P48788 182 aa28.42■■■□□ 2.14
CDKN2A-212ENST00000578845 INHBEP58166 350 aa28.41■■■□□ 2.14
CDKN2A-212ENST00000578845 HHIPL2Q6UWX4 724 aa28.41■■■□□ 2.14
CDKN2A-212ENST00000578845 ANKRD13AQ8IZ07 590 aa28.41■■■□□ 2.14
CDKN2A-212ENST00000578845 PA2G4Q9UQ80 394 aaKnown RBP28.41■■■□□ 2.14
CDKN2A-212ENST00000578845 MYH13Q9UKX3 1938 aa28.41■■■□□ 2.14
CDKN2A-212ENST00000578845 TCP10L2B9ZVM9 353 aa28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 TBC1D8O95759 1140 aa28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 FKBP1CQ5VVH2 108 aa28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 APOBEC3HQ6NTF7 200 aaKnown RBP28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 ATF7IPQ6VMQ6 1270 aa28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 CTU1Q7Z7A3 348 aaKnown RBP28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 CDAN1Q8IWY9 1227 aa28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 TMEM39BQ9GZU3 492 aa28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 OTOFQ9HC10 1997 aa28.4■■■□□ 2.14
CDKN2A-212ENST00000578845 ALDH1A1P00352 501 aa28.39■■■□□ 2.14
CDKN2A-212ENST00000578845 BCAR3O75815 825 aa28.38■■■□□ 2.13
CDKN2A-212ENST00000578845 RGS19P49795 217 aa28.38■■■□□ 2.13
CDKN2A-212ENST00000578845 FAM83AQ86UY5 434 aa28.38■■■□□ 2.13
CDKN2A-212ENST00000578845 ZNF296Q8WUU4 475 aaPredicted RBP28.38■■■□□ 2.13
CDKN2A-212ENST00000578845 SEMA3EO15041 775 aa28.37■■■□□ 2.13
CDKN2A-212ENST00000578845 MIER1Q8N108 512 aa28.37■■■□□ 2.13
CDKN2A-212ENST00000578845 GNL3LQ9NVN8 582 aaKnown RBP28.37■■■□□ 2.13
CDKN2A-212ENST00000578845 SALL1Q9NSC2 1324 aa28.37■■■□□ 2.13
CDKN2A-212ENST00000578845 RPAP1Q9BWH6 1393 aaPredicted RBP28.37■■■□□ 2.13
CDKN2A-212ENST00000578845 GPR25O00155 361 aa28.36■■■□□ 2.13
CDKN2A-212ENST00000578845 GJA5P36382 358 aa28.36■■■□□ 2.13
CDKN2A-212ENST00000578845 IFNL1Q8IU54 200 aa28.36■■■□□ 2.13
CDKN2A-212ENST00000578845 TMOD2Q9NZR1 351 aa28.36■■■□□ 2.13
CDKN2A-212ENST00000578845 SRGAP3O43295 1099 aa28.35■■■□□ 2.13
CDKN2A-212ENST00000578845 DENND2AQ9ULE3 1009 aa28.35■■■□□ 2.13
CDKN2A-212ENST00000578845 TNNQ9UQP3 1299 aa28.35■■■□□ 2.13
CDKN2A-212ENST00000578845 PHKA1P46020 1223 aa28.34■■■□□ 2.13
CDKN2A-212ENST00000578845 CACNB3P54284 484 aa28.34■■■□□ 2.13
CDKN2A-212ENST00000578845 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-212ENST00000578845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.34■■■□□ 2.13
CDKN2A-212ENST00000578845 FRAT1Q92837 279 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-212ENST00000578845 TESPA1A2RU30 521 aaPredicted RBP28.33■■■□□ 2.13
CDKN2A-212ENST00000578845 IGF2BP3O00425 579 aaKnown RBP eCLIP28.33■■■□□ 2.13
CDKN2A-212ENST00000578845 PRDX5P30044 214 aa28.33■■■□□ 2.13
CDKN2A-212ENST00000578845 DIEXFQ68CQ4 756 aaKnown RBP28.33■■■□□ 2.13
CDKN2A-212ENST00000578845 R3HDMLQ9H3Y0 253 aa28.33■■■□□ 2.13
CDKN2A-212ENST00000578845 PDS5AQ29RF7 1337 aaKnown RBP28.33■■■□□ 2.13
CDKN2A-212ENST00000578845 HNRNPUQ00839 825 aaKnown RBP eCLIP28.32■■■□□ 2.12
CDKN2A-212ENST00000578845 PKN2Q16513 984 aaKnown RBP28.32■■■□□ 2.12
CDKN2A-212ENST00000578845 CCDC102BQ68D86 513 aa28.32■■■□□ 2.12
CDKN2A-212ENST00000578845 DAGLAQ9Y4D2 1042 aa28.32■■■□□ 2.12
CDKN2A-212ENST00000578845 GNAI2P04899 355 aa28.31■■■□□ 2.12
CDKN2A-212ENST00000578845 ADORA1P30542 326 aa28.31■■■□□ 2.12
CDKN2A-212ENST00000578845 MAP3K9P80192 1104 aa28.31■■■□□ 2.12
CDKN2A-212ENST00000578845 VGLL4Q14135 290 aa28.31■■■□□ 2.12
CDKN2A-212ENST00000578845 OPTNQ96CV9 577 aa28.31■■■□□ 2.12
CDKN2A-212ENST00000578845 ELP3Q9H9T3 547 aa28.31■■■□□ 2.12
CDKN2A-212ENST00000578845 LDHBP07195 334 aaKnown RBP28.3■■■□□ 2.12
CDKN2A-212ENST00000578845 DIXDC1Q155Q3 683 aa28.3■■■□□ 2.12
CDKN2A-212ENST00000578845 ZKSCAN2Q63HK3 967 aa28.3■■■□□ 2.12
CDKN2A-212ENST00000578845 HOOK2Q96ED9 719 aa28.3■■■□□ 2.12
CDKN2A-212ENST00000578845 AKAP2Q9Y2D5 859 aa28.3■■■□□ 2.12
CDKN2A-212ENST00000578845 FKTNO75072 461 aa28.29■■■□□ 2.12
CDKN2A-212ENST00000578845 CLUAP1Q96AJ1 413 aa28.29■■■□□ 2.12
CDKN2A-212ENST00000578845 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.29■■■□□ 2.12
CDKN2A-212ENST00000578845 A0A1B0GUL7 405 aa28.28■■■□□ 2.12
CDKN2A-212ENST00000578845 TIMM10P62072 90 aa28.28■■■□□ 2.12
CDKN2A-212ENST00000578845 TFCP2Q12800 502 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms