RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 CCDC85CA6NKD9 419 aa21.63■■□□□ 1.05
LITAF-211ENST00000572255 SLC5A1P13866 664 aa21.63■■□□□ 1.05
LITAF-211ENST00000572255 SPRYD7Q5W111 196 aa21.63■■□□□ 1.05
LITAF-211ENST00000572255 ARHGAP45Q92619 1136 aa21.63■■□□□ 1.05
LITAF-211ENST00000572255 MEIS3Q99687 375 aa21.63■■□□□ 1.05
LITAF-211ENST00000572255 FBXO3Q9UK99 471 aa21.63■■□□□ 1.05
LITAF-211ENST00000572255 CIAO1O76071 339 aa21.62■■□□□ 1.05
LITAF-211ENST00000572255 HDLBPQ00341 1268 aaKnown RBP21.62■■□□□ 1.05
LITAF-211ENST00000572255 SREBF2Q12772 1141 aa21.62■■□□□ 1.05
LITAF-211ENST00000572255 SLC10A4Q96EP9 437 aa21.62■■□□□ 1.05
LITAF-211ENST00000572255 CLMNQ96JQ2 1002 aa21.62■■□□□ 1.05
LITAF-211ENST00000572255 INTS3Q68E01 1043 aaKnown RBP21.61■■□□□ 1.05
LITAF-211ENST00000572255 TEKT1Q969V4 418 aa21.61■■□□□ 1.05
LITAF-211ENST00000572255 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.61■■□□□ 1.05
LITAF-211ENST00000572255 TCP10L2B9ZVM9 353 aa21.6■■□□□ 1.05
LITAF-211ENST00000572255 USP2O75604 605 aaPredicted RBP21.6■■□□□ 1.05
LITAF-211ENST00000572255 TBC1D8O95759 1140 aa21.6■■□□□ 1.05
LITAF-211ENST00000572255 IREB2P48200 963 aaKnown RBP21.6■■□□□ 1.05
LITAF-211ENST00000572255 ATP2B3Q16720 1220 aa21.6■■□□□ 1.05
LITAF-211ENST00000572255 CEP126Q9P2H0 1117 aa21.6■■□□□ 1.05
LITAF-211ENST00000572255 SUGT1Q9Y2Z0 365 aa21.6■■□□□ 1.05
LITAF-211ENST00000572255 OTOFQ9HC10 1997 aa21.59■■□□□ 1.05
LITAF-211ENST00000572255 LAMB1P07942 1786 aa21.59■■□□□ 1.05
LITAF-211ENST00000572255 UNCXA6NJT0 531 aa21.59■■□□□ 1.05
LITAF-211ENST00000572255 WNK4Q96J92 1243 aa21.59■■□□□ 1.05
LITAF-211ENST00000572255 TEPSINQ96N21 525 aa21.59■■□□□ 1.05
LITAF-211ENST00000572255 PA2G4Q9UQ80 394 aaKnown RBP21.59■■□□□ 1.05
LITAF-211ENST00000572255 MAST3O60307 1309 aa21.58■■□□□ 1.05
LITAF-211ENST00000572255 GNAI3P08754 354 aa21.58■■□□□ 1.05
LITAF-211ENST00000572255 IL15P40933 162 aaPredicted RBP21.58■■□□□ 1.05
LITAF-211ENST00000572255 TNNI2P48788 182 aa21.58■■□□□ 1.05
LITAF-211ENST00000572255 CDAN1Q8IWY9 1227 aa21.58■■□□□ 1.05
LITAF-211ENST00000572255 WDR66Q8TBY9 1149 aa21.58■■□□□ 1.05
LITAF-211ENST00000572255 MRIQ9BWK5 157 aa21.58■■□□□ 1.05
LITAF-211ENST00000572255 TMEM39BQ9GZU3 492 aa21.58■■□□□ 1.05
LITAF-211ENST00000572255 IPO8O15397 1037 aaKnown RBP21.57■■□□□ 1.04
LITAF-211ENST00000572255 ZBTB48P10074 688 aaPredicted RBP21.57■■□□□ 1.04
LITAF-211ENST00000572255 ZDHHC15Q96MV8 337 aa21.57■■□□□ 1.04
LITAF-211ENST00000572255 COPRSQ9NQ92 184 aa21.57■■□□□ 1.04
LITAF-211ENST00000572255 MANSC4A6NHS7 340 aaPredicted RBP21.56■■□□□ 1.04
LITAF-211ENST00000572255 BCAR3O75815 825 aa21.56■■□□□ 1.04
LITAF-211ENST00000572255 TRIM27P14373 513 aa21.56■■□□□ 1.04
LITAF-211ENST00000572255 CACNB3P54284 484 aa21.56■■□□□ 1.04
LITAF-211ENST00000572255 CTU1Q7Z7A3 348 aaKnown RBP21.56■■□□□ 1.04
LITAF-211ENST00000572255 ANKRD13AQ8IZ07 590 aa21.56■■□□□ 1.04
LITAF-211ENST00000572255 MIER1Q8N108 512 aa21.56■■□□□ 1.04
LITAF-211ENST00000572255 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
LITAF-211ENST00000572255 INHBEP58166 350 aa21.55■■□□□ 1.04
LITAF-211ENST00000572255 APOBEC3HQ6NTF7 200 aaKnown RBP21.55■■□□□ 1.04
LITAF-211ENST00000572255 HHIPL2Q6UWX4 724 aa21.55■■□□□ 1.04
LITAF-211ENST00000572255 ATF7IPQ6VMQ6 1270 aa21.55■■□□□ 1.04
LITAF-211ENST00000572255 ZNF296Q8WUU4 475 aaPredicted RBP21.55■■□□□ 1.04
LITAF-211ENST00000572255 CFHR5Q9BXR6 569 aa21.55■■□□□ 1.04
LITAF-211ENST00000572255 GNL3LQ9NVN8 582 aaKnown RBP21.55■■□□□ 1.04
LITAF-211ENST00000572255 TMOD2Q9NZR1 351 aa21.55■■□□□ 1.04
LITAF-211ENST00000572255 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
LITAF-211ENST00000572255 GPR25O00155 361 aa21.54■■□□□ 1.04
LITAF-211ENST00000572255 NOM1Q5C9Z4 860 aaKnown RBP21.54■■□□□ 1.04
LITAF-211ENST00000572255 SRGAP3O43295 1099 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 ALDH1A1P00352 501 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 GJA5P36382 358 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 PHKA1P46020 1223 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 HNRNPUQ00839 825 aaKnown RBP eCLIP21.53■■□□□ 1.04
LITAF-211ENST00000572255 MTX1Q13505 466 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 DIEXFQ68CQ4 756 aaKnown RBP21.53■■□□□ 1.04
LITAF-211ENST00000572255 IFNL1Q8IU54 200 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 R3HDMLQ9H3Y0 253 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 ELP3Q9H9T3 547 aa21.53■■□□□ 1.04
LITAF-211ENST00000572255 ADORA1P30542 326 aa21.52■■□□□ 1.04
LITAF-211ENST00000572255 FKBP1CQ5VVH2 108 aa21.52■■□□□ 1.04
LITAF-211ENST00000572255 FAM83AQ86UY5 434 aa21.52■■□□□ 1.04
LITAF-211ENST00000572255 CLUAP1Q96AJ1 413 aa21.52■■□□□ 1.04
LITAF-211ENST00000572255 IGF2BP3O00425 579 aaKnown RBP eCLIP21.51■■□□□ 1.03
LITAF-211ENST00000572255 SEMA3EO15041 775 aa21.51■■□□□ 1.03
LITAF-211ENST00000572255 PRDX5P30044 214 aa21.51■■□□□ 1.03
LITAF-211ENST00000572255 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.51■■□□□ 1.03
LITAF-211ENST00000572255 DENND2AQ9ULE3 1009 aa21.51■■□□□ 1.03
LITAF-211ENST00000572255 RGS19P49795 217 aa21.5■■□□□ 1.03
LITAF-211ENST00000572255 MAP3K9P80192 1104 aa21.5■■□□□ 1.03
LITAF-211ENST00000572255 DIXDC1Q155Q3 683 aa21.5■■□□□ 1.03
LITAF-211ENST00000572255 OPTNQ96CV9 577 aa21.5■■□□□ 1.03
LITAF-211ENST00000572255 DAGLAQ9Y4D2 1042 aa21.5■■□□□ 1.03
LITAF-211ENST00000572255 SALL1Q9NSC2 1324 aa21.5■■□□□ 1.03
LITAF-211ENST00000572255 FKTNO75072 461 aa21.49■■□□□ 1.03
LITAF-211ENST00000572255 GNAI2P04899 355 aa21.49■■□□□ 1.03
LITAF-211ENST00000572255 LDHBP07195 334 aaKnown RBP21.49■■□□□ 1.03
LITAF-211ENST00000572255 TIMM10P62072 90 aa21.49■■□□□ 1.03
LITAF-211ENST00000572255 TFCP2Q12800 502 aa21.49■■□□□ 1.03
LITAF-211ENST00000572255 VGLL4Q14135 290 aa21.49■■□□□ 1.03
LITAF-211ENST00000572255 CCDC102BQ68D86 513 aa21.49■■□□□ 1.03
LITAF-211ENST00000572255 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.49■■□□□ 1.03
LITAF-211ENST00000572255 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
LITAF-211ENST00000572255 ZBTB22O15209 634 aa21.48■■□□□ 1.03
LITAF-211ENST00000572255 PKN2Q16513 984 aaKnown RBP21.48■■□□□ 1.03
LITAF-211ENST00000572255 CNKSR2Q8WXI2 1034 aa21.48■■□□□ 1.03
LITAF-211ENST00000572255 HOOK2Q96ED9 719 aa21.48■■□□□ 1.03
LITAF-211ENST00000572255 CSADQ9Y600 493 aa21.48■■□□□ 1.03
LITAF-211ENST00000572255 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
LITAF-211ENST00000572255 TESPA1A2RU30 521 aaPredicted RBP21.47■■□□□ 1.03
LITAF-211ENST00000572255 ZKSCAN2Q63HK3 967 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms