RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 NF2P35240 595 aa15.49■□□□□ 0.07
CTDNEP1-205ENST00000570828 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
CTDNEP1-205ENST00000570828 DLGAP5Q15398 846 aa15.49■□□□□ 0.07
CTDNEP1-205ENST00000570828 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
CTDNEP1-205ENST00000570828 KIF16BQ96L93 1317 aa15.48■□□□□ 0.07
CTDNEP1-205ENST00000570828 ZNF646O15015 1829 aaPredicted RBP15.48■□□□□ 0.07
CTDNEP1-205ENST00000570828 UBTFL1P0CB47 393 aaPredicted RBP15.48■□□□□ 0.07
CTDNEP1-205ENST00000570828 GYG1P46976 350 aa15.48■□□□□ 0.07
CTDNEP1-205ENST00000570828 LRRC24Q50LG9 513 aa15.48■□□□□ 0.07
CTDNEP1-205ENST00000570828 VPS37DQ86XT2 251 aa15.48■□□□□ 0.07
CTDNEP1-205ENST00000570828 FAM155AB1AL88 458 aaPredicted RBP15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 MYO1BO43795 1136 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 SLC10A3P09131 477 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 PYGBP11216 843 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 RARSP54136 660 aaKnown RBP15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 MMRN1Q13201 1228 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 TTLL12Q14166 644 aaPredicted RBP15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 MFSD14BQ5SR56 506 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 PRAMEF18Q5VWM3 479 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 TDRD7Q8NHU6 1098 aaKnown RBP15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 KLHDC4Q8TBB5 520 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 ZBED3Q96IU2 234 aaPredicted RBP15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 PAPPA2Q9BXP8 1791 aa15.47■□□□□ 0.07
CTDNEP1-205ENST00000570828 FAM205AQ6ZU69 1335 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 PDE8BO95263 885 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 PRKCSHP14314 528 aaPredicted RBP15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 CFAP100Q494V2 611 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 CAVIN4Q5BKX8 364 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 SPNS2Q8IVW8 549 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 MTMR14Q8NCE2 650 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 FAM84BQ96KN1 310 aaPredicted RBP15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 ZIC5Q96T25 663 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 HDAC5Q9UQL6 1122 aa15.46■□□□□ 0.07
CTDNEP1-205ENST00000570828 COL1A1P02452 1464 aaPredicted RBP15.46■□□□□ 0.06
CTDNEP1-205ENST00000570828 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
CTDNEP1-205ENST00000570828 RBM5P52756 815 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTDNEP1-205ENST00000570828 PUM3Q15397 648 aaKnown RBP15.45■□□□□ 0.06
CTDNEP1-205ENST00000570828 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
CTDNEP1-205ENST00000570828 RASAL3Q86YV0 1011 aa15.45■□□□□ 0.06
CTDNEP1-205ENST00000570828 VGLL2Q8N8G2 317 aa15.45■□□□□ 0.06
CTDNEP1-205ENST00000570828 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
CTDNEP1-205ENST00000570828 EYA2O00167 538 aa15.44■□□□□ 0.06
CTDNEP1-205ENST00000570828 IFIT1P09914 478 aaKnown RBP15.44■□□□□ 0.06
CTDNEP1-205ENST00000570828 KIF23Q02241 960 aaPredicted RBP15.44■□□□□ 0.06
CTDNEP1-205ENST00000570828 MOB2Q70IA6 237 aa15.44■□□□□ 0.06
CTDNEP1-205ENST00000570828 FBXO33Q7Z6M2 555 aa15.44■□□□□ 0.06
CTDNEP1-205ENST00000570828 CLRN2A0PK11 232 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 UBE2Q2LH0YL09 131 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 RFX5P48382 616 aaPredicted RBP15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 PTPN12Q05209 780 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 CHAF1AQ13111 956 aaPredicted RBP15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 ARMC9Q7Z3E5 817 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 ARHGAP45Q92619 1136 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 DEFB129Q9H1M3 183 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 VEZTQ9HBM0 779 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 TTF2Q9UNY4 1162 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 IQSEC3Q9UPP2 1182 aaPredicted RBP15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 PCDHAC2Q9Y5I4 1007 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 PPP2R3BQ9Y5P8 575 aa15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 LRRFIP2Q9Y608 721 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 POLR2AP24928 1970 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-205ENST00000570828 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
CTDNEP1-205ENST00000570828 SLC5A1P13866 664 aa15.42■□□□□ 0.06
CTDNEP1-205ENST00000570828 HNRNPUQ00839 825 aaKnown RBP eCLIP15.42■□□□□ 0.06
CTDNEP1-205ENST00000570828 TBC1D22AQ8WUA7 517 aa15.42■□□□□ 0.06
CTDNEP1-205ENST00000570828 SAGE1Q9NXZ1 904 aa15.42■□□□□ 0.06
CTDNEP1-205ENST00000570828 SERPINA10Q9UK55 444 aa15.42■□□□□ 0.06
CTDNEP1-205ENST00000570828 BCAMP50895 628 aa15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 PRKG1Q13976 671 aa15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 LPIN2Q92539 896 aa15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 PRMT6Q96LA8 375 aaPredicted RBP15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 MEIS3Q99687 375 aa15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 SIL1Q9H173 461 aa15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 PCDHB8Q9UN66 801 aa15.41■□□□□ 0.06
CTDNEP1-205ENST00000570828 CIAO1O76071 339 aa15.4■□□□□ 0.06
CTDNEP1-205ENST00000570828 GNAI3P08754 354 aa15.4■□□□□ 0.06
CTDNEP1-205ENST00000570828 FGFR2P21802 821 aa15.4■□□□□ 0.06
CTDNEP1-205ENST00000570828 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
CTDNEP1-205ENST00000570828 TNFAIP1Q13829 316 aa15.4■□□□□ 0.06
CTDNEP1-205ENST00000570828 FRAT1Q92837 279 aaPredicted RBP15.4■□□□□ 0.06
CTDNEP1-205ENST00000570828 TRIM27P14373 513 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 CRKP46108 304 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 SUPT20HL1Q3ZLR7 823 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 ATG9AQ7Z3C6 839 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 MARVELD3Q96A59 401 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 RNF186Q9NXI6 227 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 CEP126Q9P2H0 1117 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 ANGEL1Q9UNK9 670 aaKnown RBP15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 AOX1Q06278 1338 aa15.39■□□□□ 0.05
CTDNEP1-205ENST00000570828 PPP1R12BO60237 982 aaPredicted RBP15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 TRPA1O75762 1119 aa15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 IL15P40933 162 aaPredicted RBP15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 RASA3Q14644 834 aa15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 ATF7IPQ6VMQ6 1270 aa15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 ZNF70Q9UC06 446 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms