RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ZKSCAN3Q9BRR0 538 aa6.67□□□□□ -1.34
HDGFL3-202ENST00000562702 RAD18Q9NS91 495 aa6.67□□□□□ -1.34
HDGFL3-202ENST00000562702 PAPLNO95428 1278 aa6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 CYP11A1P05108 521 aa6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 NFICP08651 508 aa6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 ZNF765Q7L2R6 523 aa6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 KSR1Q8IVT5 923 aa6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 DDX54Q8TDD1 881 aaKnown RBP6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 BHLHE41Q9C0J9 482 aaPredicted RBP6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 ZNF777Q9ULD5 760 aaPredicted RBP6.66□□□□□ -1.34
HDGFL3-202ENST00000562702 ATG7O95352 703 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 DLGAP3O95886 979 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 PDGFAP04085 211 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 EHHADHQ08426 723 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 COL19A1Q14993 1142 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 CYP27C1Q4G0S4 372 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 DYMQ7RTS9 669 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 SNX29Q8TEQ0 813 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 ACTL7BQ9Y614 415 aa6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.65□□□□□ -1.34
HDGFL3-202ENST00000562702 ZNF792Q3KQV3 632 aa6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 FBLN7Q53RD9 439 aa6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 TMEM164Q5U3C3 297 aa6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 ATG4DQ86TL0 474 aaPredicted RBP6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 HELQQ8TDG4 1101 aa6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 BCL7CQ8WUZ0 217 aaPredicted RBP6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 GATA6Q92908 595 aa6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 CHRDQ9H2X0 955 aa6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 GGNBP2Q9H3C7 697 aa6.64□□□□□ -1.35
HDGFL3-202ENST00000562702 EREGO14944 169 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 ATP2B4P23634 1241 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 USP5P45974 858 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 AAMPQ13685 434 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 ZNF124Q15973 351 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 AKAP4Q5JQC9 854 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 SEMA6CQ9H3T2 930 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 SEPT3Q9UH03 358 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
HDGFL3-202ENST00000562702 ASPAP45381 313 aa6.62□□□□□ -1.35
HDGFL3-202ENST00000562702 POU4F3Q15319 338 aa6.62□□□□□ -1.35
HDGFL3-202ENST00000562702 OGFOD3Q6PK18 319 aa6.62□□□□□ -1.35
HDGFL3-202ENST00000562702 FAM168AQ92567 244 aa6.62□□□□□ -1.35
HDGFL3-202ENST00000562702 AMOTL2Q9Y2J4 779 aa6.62□□□□□ -1.35
HDGFL3-202ENST00000562702 A6NHS1 94 aa6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 TNFRSF21O75509 655 aa6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 MAOBP27338 520 aa6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 TMEM40Q8WWA1 233 aa6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 CORO1BQ9BR76 489 aa6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 CLEC4MQ9H2X3 399 aaPredicted RBP6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 ACSS3Q9H6R3 686 aa6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 RC3H2Q9HBD1 1191 aaKnown RBP6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 DAGLAQ9Y4D2 1042 aa6.61□□□□□ -1.35
HDGFL3-202ENST00000562702 EIF1AXP47813 144 aaKnown RBP6.6□□□□□ -1.35
HDGFL3-202ENST00000562702 HNRNPUQ00839 825 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDGFL3-202ENST00000562702 PCDH1Q08174 1060 aa6.6□□□□□ -1.35
HDGFL3-202ENST00000562702 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
HDGFL3-202ENST00000562702 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-202ENST00000562702 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-202ENST00000562702 NETO1Q8TDF5 533 aa6.59□□□□□ -1.35
HDGFL3-202ENST00000562702 FAM105AQ9NUU6 356 aa6.59□□□□□ -1.35
HDGFL3-202ENST00000562702 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
HDGFL3-202ENST00000562702 FUT4P22083 530 aa6.58□□□□□ -1.36
HDGFL3-202ENST00000562702 ARHGAP27Q6ZUM4 889 aa6.58□□□□□ -1.36
HDGFL3-202ENST00000562702 SPRED2Q7Z698 418 aa6.58□□□□□ -1.36
HDGFL3-202ENST00000562702 PI4K2BQ8TCG2 481 aa6.58□□□□□ -1.36
HDGFL3-202ENST00000562702 NRSN2Q9GZP1 204 aa6.58□□□□□ -1.36
HDGFL3-202ENST00000562702 POLIQ9UNA4 740 aa6.58□□□□□ -1.36
HDGFL3-202ENST00000562702 CARMIL2Q6F5E8 1435 aa6.58□□□□□ -1.36
HDGFL3-202ENST00000562702 A0A096LPE4 126 aa6.57□□□□□ -1.36
HDGFL3-202ENST00000562702 A0A1W2PPZ6 126 aa6.57□□□□□ -1.36
HDGFL3-202ENST00000562702 MPSTP25325 297 aa6.57□□□□□ -1.36
HDGFL3-202ENST00000562702 SPOCD1Q6ZMY3 1216 aa6.57□□□□□ -1.36
HDGFL3-202ENST00000562702 FAM84AQ96KN4 292 aa6.57□□□□□ -1.36
HDGFL3-202ENST00000562702 C1GALT1Q9NS00 363 aa6.57□□□□□ -1.36
HDGFL3-202ENST00000562702 VAV3Q9UKW4 847 aa6.57□□□□□ -1.36
HDGFL3-202ENST00000562702 BNIP3Q12983 259 aa6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 PEAR1Q5VY43 1037 aaPredicted RBP6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 GLIS3Q8NEA6 775 aa6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 BHLHE22Q8NFJ8 381 aaPredicted RBP6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 GSX1Q9H4S2 264 aaPredicted RBP6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 PIDD1Q9HB75 910 aa6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 LATS2Q9NRM7 1088 aa6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 FAM53CQ9NYF3 392 aa6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 FOXD3Q9UJU5 478 aaPredicted RBP6.56□□□□□ -1.36
HDGFL3-202ENST00000562702 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 METTL12A8MUP2 240 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 FAM13AO94988 1023 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 PRKCQQ04759 706 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 SEZ6L2Q6UXD5 910 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 LGR6Q9HBX8 967 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
HDGFL3-202ENST00000562702 AOC2O75106 756 aa6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 RNASE1P07998 156 aaKnown RBP6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 CD8BP10966 210 aa6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 ZNF423Q2M1K9 1284 aa6.54□□□□□ -1.36
HDGFL3-202ENST00000562702 CCNJLQ8IV13 435 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms