RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 ANKRD34AQ69YU3 496 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 SMG8Q8ND04 991 aaKnown RBP4.46□□□□□ -1.7
CHD9-204ENST00000561869 SETDB2Q96T68 719 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 RUSC1Q9BVN2 902 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 GADD45BO75293 160 aaPredicted RBP4.45□□□□□ -1.7
CHD9-204ENST00000561869 TIAF1O95411 115 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 ECEL1O95672 775 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 CD97P48960 835 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.45□□□□□ -1.7
CHD9-204ENST00000561869 RPS26P11Q5JNZ5 115 aaPredicted RBP4.45□□□□□ -1.7
CHD9-204ENST00000561869 MCTP1Q6DN14 999 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 FAM20CQ8IXL6 584 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 MYRFLQ96LU7 910 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 USP26Q9BXU7 913 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 BCO2Q9BYV7 579 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 SUGCTQ9HAC7 445 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 PCMTD2Q9NV79 361 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 TRAK1Q9UPV9 953 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 RAXQ9Y2V3 346 aa4.45□□□□□ -1.7
CHD9-204ENST00000561869 PATL2C9JE40 543 aaKnown RBP4.44□□□□□ -1.7
CHD9-204ENST00000561869 DHX15O43143 795 aaKnown RBP4.44□□□□□ -1.7
CHD9-204ENST00000561869 TGFB1P01137 390 aa4.44□□□□□ -1.7
CHD9-204ENST00000561869 MAOBP27338 520 aa4.44□□□□□ -1.7
CHD9-204ENST00000561869 EXOSC6Q5RKV6 272 aaKnown RBP4.44□□□□□ -1.7
CHD9-204ENST00000561869 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.44□□□□□ -1.7
CHD9-204ENST00000561869 ZSCAN29Q8IWY8 852 aaPredicted RBP4.44□□□□□ -1.7
CHD9-204ENST00000561869 UTP4Q969X6 686 aaKnown RBP4.44□□□□□ -1.7
CHD9-204ENST00000561869 WWC3Q9ULE0 1092 aa4.44□□□□□ -1.7
CHD9-204ENST00000561869 EIF4EBP3O60516 100 aaPredicted RBP4.43□□□□□ -1.7
CHD9-204ENST00000561869 ADAMTS4O75173 837 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 PDIA4P13667 645 aaKnown RBP4.43□□□□□ -1.7
CHD9-204ENST00000561869 DRD2P14416 443 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 FCGRTP55899 365 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 POU4F3Q15319 338 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 NUTM2GQ5VZR2 741 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 NXPE4Q6UWF7 544 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 SLC51AQ86UW1 340 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 AEBP1Q8IUX7 1158 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 OSBPL7Q9BZF2 842 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 C7orf69Q9H7B7 122 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 NLRP2Q9NX02 1062 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 STOML1Q9UBI4 398 aa4.43□□□□□ -1.7
CHD9-204ENST00000561869 HMX2A2RU54 273 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 IGLV1-40P01703 118 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 CYP11A1P05108 521 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 P4HBP07237 508 aaKnown RBP4.42□□□□□ -1.7
CHD9-204ENST00000561869 BMP3P12645 472 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 MAPK8P45983 427 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 ZNF157P51786 506 aaPredicted RBP4.42□□□□□ -1.7
CHD9-204ENST00000561869 FDX2Q6P4F2 183 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 SND1Q7KZF4 910 aaKnown RBP eCLIP4.42□□□□□ -1.7
CHD9-204ENST00000561869 ZDHHC13Q8IUH4 622 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 CLEC10AQ8IUN9 316 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 TRIM42Q8IWZ5 723 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 C12orf50Q8NA57 414 aaPredicted RBP4.42□□□□□ -1.7
CHD9-204ENST00000561869 C2CD4AQ8NCU7 369 aaPredicted RBP4.42□□□□□ -1.7
CHD9-204ENST00000561869 C3orf58Q8NDZ4 430 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 STK35Q8TDR2 534 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 FBF1Q8TES7 1133 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 FAM83CQ9BQN1 747 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 GOLGA2P5Q9HBQ8 144 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 CYP4F12Q9HCS2 524 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 HIF3AQ9Y2N7 669 aa4.42□□□□□ -1.7
CHD9-204ENST00000561869 KIAA1324LA8MWY0 1029 aaPredicted RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 SART1O43290 800 aaKnown RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 XRCC5P13010 732 aaKnown RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 SOX4Q06945 474 aaPredicted RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 SGO2Q562F6 1265 aa4.41□□□□□ -1.7
CHD9-204ENST00000561869 RNF43Q68DV7 783 aa4.41□□□□□ -1.7
CHD9-204ENST00000561869 CDPF1Q6NVV7 123 aa4.41□□□□□ -1.7
CHD9-204ENST00000561869 DNAJC14Q6Y2X3 702 aaPredicted RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 DTHD1Q6ZMT9 781 aa4.41□□□□□ -1.7
CHD9-204ENST00000561869 BEND4Q6ZU67 534 aa4.41□□□□□ -1.7
CHD9-204ENST00000561869 GSX1Q9H4S2 264 aaPredicted RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 OAS3Q9Y6K5 1087 aaKnown RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 COL17A1Q9UMD9 1497 aaPredicted RBP4.41□□□□□ -1.7
CHD9-204ENST00000561869 ADH5P11766 374 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 MAP4P27816 1152 aaKnown RBP4.4□□□□□ -1.71
CHD9-204ENST00000561869 NFIAQ12857 509 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 AP3B2Q13367 1082 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 ALG1LQ6GMV1 187 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 PDZD3Q86UT5 571 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 DDX54Q8TDD1 881 aaKnown RBP4.4□□□□□ -1.71
CHD9-204ENST00000561869 EZH1Q92800 747 aaPredicted RBP4.4□□□□□ -1.71
CHD9-204ENST00000561869 WDR89Q96FK6 387 aaPredicted RBP4.4□□□□□ -1.71
CHD9-204ENST00000561869 CORO1BQ9BR76 489 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 WDR18Q9BV38 432 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 CCDC86Q9H6F5 360 aaKnown RBP4.4□□□□□ -1.71
CHD9-204ENST00000561869 ZFYVE1Q9HBF4 777 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 TMEM39AQ9NV64 488 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 PPP4R2Q9NY27 417 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 ACTL7BQ9Y614 415 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 SYNGAP1Q96PV0 1343 aa4.4□□□□□ -1.71
CHD9-204ENST00000561869 ANKRD33BA6NCL7 494 aa4.39□□□□□ -1.71
CHD9-204ENST00000561869 PRR19A6NJB7 356 aa4.39□□□□□ -1.71
CHD9-204ENST00000561869 GIPC1O14908 333 aa4.39□□□□□ -1.71
CHD9-204ENST00000561869 GSC2O15499 205 aa4.39□□□□□ -1.71
CHD9-204ENST00000561869 GAS2O43903 313 aaKnown RBP4.39□□□□□ -1.71
CHD9-204ENST00000561869 ZNF862O60290 1169 aa4.39□□□□□ -1.71
CHD9-204ENST00000561869 AOC2O75106 756 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms