RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	KRT76	Q01546	638 aa		10.2	□□□□□ -0.78
MARK3-223	ENST00000561071	LAMC2	Q13753	1193 aa		10.2	□□□□□ -0.78
MARK3-223	ENST00000561071	BCL9L	Q86UU0	1499 aa		10.2	□□□□□ -0.78
MARK3-223	ENST00000561071	NUDT16	Q96DE0	195 aa	Known RBP	10.2	□□□□□ -0.78
MARK3-223	ENST00000561071	KCNMB2	Q9Y691	235 aa		10.2	□□□□□ -0.78
MARK3-223	ENST00000561071	ATRN	O75882	1429 aa		10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	PRR36	Q9H6K5	1346 aa		10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	C2CD2L	O14523	706 aa		10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	PDGFA	P04085	211 aa		10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	MX2	P20592	715 aa		10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	TRIP4	Q15650	581 aa	Predicted RBP	10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	PIK3R5	Q8WYR1	880 aa		10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	SLC30A3	Q99726	388 aa		10.19	□□□□□ -0.78
MARK3-223	ENST00000561071	MZF1	P28698	734 aa	Predicted RBP	10.18	□□□□□ -0.78
MARK3-223	ENST00000561071	FAM13B	Q9NYF5	915 aa		10.18	□□□□□ -0.78
MARK3-223	ENST00000561071	DLC1	Q96QB1	1528 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071		A6NHS1	94 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	GMPR	P36959	345 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	SPEM2	Q0P670	501 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	TREML4	Q6UXN2	200 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	CNTNAP3B	Q96NU0	1288 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	CNTNAP3	Q9BZ76	1288 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	GGNBP2	Q9H3C7	697 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	MBIP	Q9NS73	344 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	BRPF3	Q9ULD4	1205 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	KIF1A	Q12756	1690 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	USP32	Q8NFA0	1604 aa		10.17	□□□□□ -0.78
MARK3-223	ENST00000561071	TNS3	Q68CZ2	1445 aa		10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	XYLB	O75191	536 aa		10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	BMP4	P12644	408 aa		10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	FAM182B	Q5T319	152 aa		10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	LCE2A	Q5TA79	106 aa	Predicted RBP	10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	KRT25	Q7Z3Z0	450 aa		10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	UNC5CL	Q8IV45	518 aa		10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	GSX2	Q9BZM3	304 aa		10.16	□□□□□ -0.78
MARK3-223	ENST00000561071	SBNO1	A3KN83	1393 aa		10.15	□□□□□ -0.78
MARK3-223	ENST00000561071	FAM83G	A6ND36	823 aa		10.15	□□□□□ -0.78
MARK3-223	ENST00000561071	NDUFB5	O43674	189 aa		10.15	□□□□□ -0.78
MARK3-223	ENST00000561071	C8orf34	Q49A92	452 aa		10.15	□□□□□ -0.78
MARK3-223	ENST00000561071	NGDN	Q8NEJ9	315 aa	Known RBP	10.15	□□□□□ -0.78
MARK3-223	ENST00000561071	ANKAR	Q7Z5J8	1434 aa		10.15	□□□□□ -0.79
MARK3-223	ENST00000561071	SLIT2	O94813	1529 aa		10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	MARF1	Q9Y4F3	1742 aa	Known RBP	10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	SASH3	O75995	380 aa		10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	MAPK1	P28482	360 aa		10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	CCIN	Q13939	588 aa		10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	CDK19	Q9BWU1	502 aa		10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	DCTN4	Q9UJW0	460 aa		10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	CCDC9	Q9Y3X0	531 aa	Known RBP	10.14	□□□□□ -0.79
MARK3-223	ENST00000561071	RALGAPB	Q86X10	1494 aa		10.13	□□□□□ -0.79
MARK3-223	ENST00000561071	TARS	P26639	723 aa	Known RBP	10.13	□□□□□ -0.79
MARK3-223	ENST00000561071	GJD3	Q8N144	294 aa		10.13	□□□□□ -0.79
MARK3-223	ENST00000561071	BHMT	Q93088	406 aa		10.13	□□□□□ -0.79
MARK3-223	ENST00000561071	ADGRB2	O60241	1585 aa		10.13	□□□□□ -0.79
MARK3-223	ENST00000561071	ARHGEF10	O15013	1369 aa		10.13	□□□□□ -0.79
MARK3-223	ENST00000561071	GPRASP1	Q5JY77	1395 aa		10.13	□□□□□ -0.79
MARK3-223	ENST00000561071	EGFR	P00533	1210 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	PCSK2	P16519	638 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	NFKB1	P19838	968 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	MARS	P56192	900 aa	Known RBP	10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	NUTM2G	Q5VZR2	741 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	SIN3A	Q96ST3	1273 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	ZFAT	Q9P243	1243 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	PRR12	Q9ULL5	1215 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	GLI3	P10071	1580 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	TULP4	Q9NRJ4	1543 aa		10.12	□□□□□ -0.79
MARK3-223	ENST00000561071	PCBP4	P57723	403 aa	Known RBP	10.11	□□□□□ -0.79
MARK3-223	ENST00000561071	VPS72	Q15906	364 aa		10.11	□□□□□ -0.79
MARK3-223	ENST00000561071	TMCO4	Q5TGY1	634 aa		10.11	□□□□□ -0.79
MARK3-223	ENST00000561071	PNMA5	Q96PV4	448 aa		10.11	□□□□□ -0.79
MARK3-223	ENST00000561071	BTG4	Q9NY30	223 aa		10.11	□□□□□ -0.79
MARK3-223	ENST00000561071	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.11	□□□□□ -0.79
MARK3-223	ENST00000561071	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	EP400	Q96L91	3159 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	USP5	P45974	858 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	SRSF11	Q05519	484 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	NEUROD1	Q13562	356 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	CCDC27	Q2M243	656 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	SYT9	Q86SS6	491 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	TMC1	Q8TDI8	760 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	RBCK1	Q9BYM8	510 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	C11orf16	Q9NQ32	467 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	KLF15	Q9UIH9	416 aa		10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	EIF3A	Q14152	1382 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.1	□□□□□ -0.79
MARK3-223	ENST00000561071	RPLP1	P05386	114 aa	Known RBP	10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	RARA	P10276	462 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	MAP2K3	P46734	347 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	NBPF8	Q3BBV2	869 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	TMC7	Q7Z402	723 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	ZNF438	Q7Z4V0	828 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	TTC16	Q8NEE8	873 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	FAM129B	Q96TA1	746 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	TMEM63C	Q9P1W3	806 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	ABCA3	Q99758	1704 aa		10.09	□□□□□ -0.79
MARK3-223	ENST00000561071	ATP7B	P35670	1465 aa		10.09	□□□□□ -0.79

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