RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 DUOXA2Q1HG44 320 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 PI16Q6UXB8 463 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 Q6ZS46 218 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 VN1R5Q7Z5H4 357 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 SETDB2Q96T68 719 aa7.11□□□□□ -1.27
CASC4-206ENST00000558847 H3BRJ5 948 aa7.1□□□□□ -1.27
CASC4-206ENST00000558847 SCAMP3O14828 347 aaKnown RBP7.1□□□□□ -1.27
CASC4-206ENST00000558847 FSCN2O14926 492 aa7.1□□□□□ -1.27
CASC4-206ENST00000558847 TAGLNQ01995 201 aaKnown RBP7.1□□□□□ -1.27
CASC4-206ENST00000558847 TSNAXIP1Q2TAA8 658 aa7.1□□□□□ -1.27
CASC4-206ENST00000558847 PRPF40BQ6NWY9 871 aaKnown RBP7.1□□□□□ -1.27
CASC4-206ENST00000558847 GLIS3Q8NEA6 775 aa7.1□□□□□ -1.27
CASC4-206ENST00000558847 EPS8L3Q8TE67 593 aaKnown RBP7.1□□□□□ -1.27
CASC4-206ENST00000558847 LIN7BQ9HAP6 207 aa7.1□□□□□ -1.27
CASC4-206ENST00000558847 KCNK4Q9NYG8 393 aa7.1□□□□□ -1.27
CASC4-206ENST00000558847 SART1O43290 800 aaKnown RBP7.09□□□□□ -1.27
CASC4-206ENST00000558847 COBLO75128 1261 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 RECKO95980 971 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 TGFB1P01137 390 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 GRIA4P48058 902 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 CABP4P57796 275 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 GRM2Q14416 872 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 MCTP1Q6DN14 999 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 KLHL23Q8NBE8 558 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 BSNDQ8WZ55 320 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 ABCB6Q9NP58 842 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
CASC4-206ENST00000558847 CD97P48960 835 aa7.08□□□□□ -1.28
CASC4-206ENST00000558847 ASAP3Q8TDY4 903 aa7.08□□□□□ -1.28
CASC4-206ENST00000558847 SEC31BQ9NQW1 1179 aa7.08□□□□□ -1.28
CASC4-206ENST00000558847 METTL5Q9NRN9 209 aaKnown RBP7.08□□□□□ -1.28
CASC4-206ENST00000558847 NLRP2Q9NX02 1062 aa7.08□□□□□ -1.28
CASC4-206ENST00000558847 DDX3YO15523 660 aaKnown RBP7.07□□□□□ -1.28
CASC4-206ENST00000558847 IRAK1P51617 712 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 SPRED3Q2MJR0 410 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 UVSSAQ2YD98 709 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 KRTAP1-3Q8IUG1 177 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 ARMC10Q8N2F6 343 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 UBASH3BQ8TF42 649 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 BACH2Q9BYV9 841 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 SRCIN1Q9C0H9 1055 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 EHD4Q9H223 541 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 KCNF1Q9H3M0 494 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 WWC3Q9ULE0 1092 aa7.07□□□□□ -1.28
CASC4-206ENST00000558847 A0A096LPE4 126 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 A0A1W2PPZ6 126 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 EIF4BP23588 611 aaKnown RBP7.06□□□□□ -1.28
CASC4-206ENST00000558847 ITPKAP23677 461 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 GRIK1P39086 918 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 PIP4K2BP78356 416 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 NFIAQ12857 509 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
CASC4-206ENST00000558847 HGSNATQ68CP4 663 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 KIAA1211Q6ZU35 1233 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 TRIM42Q8IWZ5 723 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 WNT8BQ93098 351 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 KLHDC7BQ96G42 594 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 ZNF576Q9H609 170 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 C7orf69Q9H7B7 122 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 AK5Q9Y6K8 562 aa7.06□□□□□ -1.28
CASC4-206ENST00000558847 HMX2A2RU54 273 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 PAX4O43316 350 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 ADAM11O75078 769 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
CASC4-206ENST00000558847 ESRRAP11474 423 aaPredicted RBP7.05□□□□□ -1.28
CASC4-206ENST00000558847 NLRP12P59046 1061 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 SLC7A3Q8WY07 619 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 CRELD1Q96HD1 420 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 C8orf37Q96NL8 207 aa7.05□□□□□ -1.28
CASC4-206ENST00000558847 MED26O95402 600 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 ZC3H6P61129 1189 aaKnown RBP7.04□□□□□ -1.28
CASC4-206ENST00000558847 PTPN12Q05209 780 aaKnown RBP7.04□□□□□ -1.28
CASC4-206ENST00000558847 IKBKEQ14164 716 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 RNF43Q68DV7 783 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 TMEM87AQ8NBN3 555 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 FAM46AQ96IP4 442 aaKnown RBP7.04□□□□□ -1.28
CASC4-206ENST00000558847 MYRFLQ96LU7 910 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 KRTAP4-12Q9BQ66 201 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 DBNDD2Q9BQY9 259 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 BCO2Q9BYV7 579 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 CLEC4MQ9H2X3 399 aaPredicted RBP7.04□□□□□ -1.28
CASC4-206ENST00000558847 SOX17Q9H6I2 414 aaPredicted RBP7.04□□□□□ -1.28
CASC4-206ENST00000558847 OSGEPQ9NPF4 335 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 PPP4R2Q9NY27 417 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 TRAK1Q9UPV9 953 aa7.04□□□□□ -1.28
CASC4-206ENST00000558847 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
CASC4-206ENST00000558847 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
CASC4-206ENST00000558847 BMP3P12645 472 aa7.03□□□□□ -1.28
CASC4-206ENST00000558847 ARL4DP49703 201 aa7.03□□□□□ -1.28
CASC4-206ENST00000558847 GP2P55259 537 aaKnown RBP7.03□□□□□ -1.28
CASC4-206ENST00000558847 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
CASC4-206ENST00000558847 FDX2Q6P4F2 183 aa7.03□□□□□ -1.28
CASC4-206ENST00000558847 INTS5Q6P9B9 1019 aaKnown RBP7.03□□□□□ -1.28
CASC4-206ENST00000558847 ZDHHC13Q8IUH4 622 aa7.03□□□□□ -1.28
CASC4-206ENST00000558847 NRSN2Q9GZP1 204 aa7.03□□□□□ -1.28
CASC4-206ENST00000558847 GAS2O43903 313 aaKnown RBP7.02□□□□□ -1.29
CASC4-206ENST00000558847 B3GALT4O96024 378 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 ZNF423Q2M1K9 1284 aa7.02□□□□□ -1.29
CASC4-206ENST00000558847 ANKRD34AQ69YU3 496 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms