RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 ZNF296Q8WUU4 475 aaPredicted RBP14.28□□□□□ -0.12
C1RL-209ENST00000543941 MEIS3Q99687 375 aa14.28□□□□□ -0.12
C1RL-209ENST00000543941 TMEM39BQ9GZU3 492 aa14.28□□□□□ -0.12
C1RL-209ENST00000543941 SERPINA10Q9UK55 444 aa14.28□□□□□ -0.12
C1RL-209ENST00000543941 TCP10L2B9ZVM9 353 aa14.27□□□□□ -0.13
C1RL-209ENST00000543941 IGF2BP3O00425 579 aaKnown RBP eCLIP14.27□□□□□ -0.13
C1RL-209ENST00000543941 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.13
C1RL-209ENST00000543941 APOBEC3HQ6NTF7 200 aaKnown RBP14.27□□□□□ -0.13
C1RL-209ENST00000543941 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
C1RL-209ENST00000543941 WNK4Q96J92 1243 aa14.27□□□□□ -0.13
C1RL-209ENST00000543941 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.13
C1RL-209ENST00000543941 GPR25O00155 361 aa14.26□□□□□ -0.13
C1RL-209ENST00000543941 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.26□□□□□ -0.13
C1RL-209ENST00000543941 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
C1RL-209ENST00000543941 SLC10A4Q96EP9 437 aa14.26□□□□□ -0.13
C1RL-209ENST00000543941 PTPN18Q99952 460 aa14.26□□□□□ -0.13
C1RL-209ENST00000543941 SIL1Q9H173 461 aa14.26□□□□□ -0.13
C1RL-209ENST00000543941 PPP2R3BQ9Y5P8 575 aa14.26□□□□□ -0.13
C1RL-209ENST00000543941 BCAR3O75815 825 aa14.25□□□□□ -0.13
C1RL-209ENST00000543941 ADORA1P30542 326 aa14.25□□□□□ -0.13
C1RL-209ENST00000543941 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
C1RL-209ENST00000543941 CTU1Q7Z7A3 348 aaKnown RBP14.25□□□□□ -0.13
C1RL-209ENST00000543941 CFHR5Q9BXR6 569 aa14.25□□□□□ -0.13
C1RL-209ENST00000543941 MYO1BO43795 1136 aa14.24□□□□□ -0.13
C1RL-209ENST00000543941 CT47B1P0C2W7 299 aaPredicted RBP14.24□□□□□ -0.13
C1RL-209ENST00000543941 UBTFL1P0CB47 393 aaPredicted RBP14.24□□□□□ -0.13
C1RL-209ENST00000543941 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
C1RL-209ENST00000543941 CAVIN4Q5BKX8 364 aa14.24□□□□□ -0.13
C1RL-209ENST00000543941 INTS3Q68E01 1043 aaKnown RBP14.24□□□□□ -0.13
C1RL-209ENST00000543941 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
C1RL-209ENST00000543941 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
C1RL-209ENST00000543941 TNRC18O15417 2968 aaPredicted RBP14.23□□□□□ -0.13
C1RL-209ENST00000543941 KIF16BQ96L93 1317 aa14.23□□□□□ -0.13
C1RL-209ENST00000543941 PPP1R12BO60237 982 aaPredicted RBP14.23□□□□□ -0.13
C1RL-209ENST00000543941 IFIT1P09914 478 aaKnown RBP14.23□□□□□ -0.13
C1RL-209ENST00000543941 PHKA1P46020 1223 aa14.23□□□□□ -0.13
C1RL-209ENST00000543941 SUPT20HL1Q3ZLR7 823 aa14.23□□□□□ -0.13
C1RL-209ENST00000543941 VPS37DQ86XT2 251 aa14.23□□□□□ -0.13
C1RL-209ENST00000543941 LPIN2Q92539 896 aa14.23□□□□□ -0.13
C1RL-209ENST00000543941 ZDHHC15Q96MV8 337 aa14.23□□□□□ -0.13
C1RL-209ENST00000543941 ELP3Q9H9T3 547 aa14.23□□□□□ -0.13
C1RL-209ENST00000543941 TESPA1A2RU30 521 aaPredicted RBP14.22□□□□□ -0.13
C1RL-209ENST00000543941 CIAO1O76071 339 aa14.22□□□□□ -0.13
C1RL-209ENST00000543941 PRDX5P30044 214 aa14.22□□□□□ -0.13
C1RL-209ENST00000543941 SOX10P56693 466 aa14.22□□□□□ -0.13
C1RL-209ENST00000543941 DIXDC1Q155Q3 683 aa14.22□□□□□ -0.13
C1RL-209ENST00000543941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.22□□□□□ -0.13
C1RL-209ENST00000543941 MRIQ9BWK5 157 aa14.22□□□□□ -0.13
C1RL-209ENST00000543941 API5Q9BZZ5 524 aaKnown RBP14.22□□□□□ -0.13
C1RL-209ENST00000543941 COPRSQ9NQ92 184 aa14.22□□□□□ -0.13
C1RL-209ENST00000543941 HPS5Q9UPZ3 1129 aa14.22□□□□□ -0.13
C1RL-209ENST00000543941 MANSC4A6NHS7 340 aaPredicted RBP14.21□□□□□ -0.13
C1RL-209ENST00000543941 SLURP2P0DP57 97 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 ZBTB48P10074 688 aaPredicted RBP14.21□□□□□ -0.13
C1RL-209ENST00000543941 SLC5A1P13866 664 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 TRIM27P14373 513 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 IREB2P48200 963 aaKnown RBP14.21□□□□□ -0.13
C1RL-209ENST00000543941 TIMM10P62072 90 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 SREBF2Q12772 1141 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 ATP2B3Q16720 1220 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 NOM1Q5C9Z4 860 aaKnown RBP14.21□□□□□ -0.13
C1RL-209ENST00000543941 ANKRD13AQ8IZ07 590 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 TBC1D22AQ8WUA7 517 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 TEKT1Q969V4 418 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 OPTNQ96CV9 577 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 DAGLAQ9Y4D2 1042 aa14.21□□□□□ -0.13
C1RL-209ENST00000543941 ZSWIM8A7E2V4 1837 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 MYH2Q9UKX2 1941 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 FRAT2O75474 233 aaPredicted RBP14.2□□□□□ -0.14
C1RL-209ENST00000543941 MLLT1Q03111 559 aaPredicted RBP14.2□□□□□ -0.14
C1RL-209ENST00000543941 NFIAQ12857 509 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 VGLL4Q14135 290 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 HHIPL2Q6UWX4 724 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 ZFPM1Q8IX07 1006 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 ARHGAP45Q92619 1136 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
C1RL-209ENST00000543941 UNCXA6NJT0 531 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 FKTNO75072 461 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 MAP3K9P80192 1104 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 CRHR2Q13324 411 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 TNFAIP1Q13829 316 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 CDC42EP5Q6NZY7 148 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 ZNF384Q8TF68 577 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 CEP126Q9P2H0 1117 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 FAM198AQ9UFP1 575 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
C1RL-209ENST00000543941 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 IL15P40933 162 aaPredicted RBP14.18□□□□□ -0.14
C1RL-209ENST00000543941 TFCP2Q12800 502 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 MTX1Q13505 466 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 CCDC102BQ68D86 513 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 FAM43AQ8N2R8 423 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 WDR66Q8TBY9 1149 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 ZKSCAN4Q969J2 545 aaPredicted RBP14.18□□□□□ -0.14
C1RL-209ENST00000543941 CLUAP1Q96AJ1 413 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 SUGT1Q9Y2Z0 365 aa14.18□□□□□ -0.14
C1RL-209ENST00000543941 INPP5BP32019 993 aa14.17□□□□□ -0.14
C1RL-209ENST00000543941 INHBEP58166 350 aa14.17□□□□□ -0.14
C1RL-209ENST00000543941 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms