RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 GLB1P16278 677 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 ARL4DP49703 201 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 NLRP12P59046 1061 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 PTPN12Q05209 780 aaKnown RBP6.86□□□□□ -1.31
LEMD3-204ENST00000542032 ZNF423Q2M1K9 1284 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 SPRED3Q2MJR0 410 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 UVSSAQ2YD98 709 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 GLIS3Q8NEA6 775 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 CEP41Q9BYV8 373 aa6.86□□□□□ -1.31
LEMD3-204ENST00000542032 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
LEMD3-204ENST00000542032 LOC100289279A0A1B0GTE1 492 aa6.85□□□□□ -1.31
LEMD3-204ENST00000542032 TREHO43280 583 aa6.85□□□□□ -1.31
LEMD3-204ENST00000542032 SPOCD1Q6ZMY3 1216 aa6.85□□□□□ -1.31
LEMD3-204ENST00000542032 TMC1Q8TDI8 760 aa6.85□□□□□ -1.31
LEMD3-204ENST00000542032 RNF208Q9H0X6 261 aa6.85□□□□□ -1.31
LEMD3-204ENST00000542032 ABCB6Q9NP58 842 aa6.85□□□□□ -1.31
LEMD3-204ENST00000542032 BIN2Q9UBW5 565 aaPredicted RBP6.85□□□□□ -1.31
LEMD3-204ENST00000542032 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
LEMD3-204ENST00000542032 DLGAP3O95886 979 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 PCDH1Q08174 1060 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 ANKRD34AQ69YU3 496 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 SLC51AQ86UW1 340 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 TMPRSS13Q9BYE2 586 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 EHD4Q9H223 541 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 ZNF576Q9H609 170 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 ADGRE2Q9UHX3 823 aa6.84□□□□□ -1.31
LEMD3-204ENST00000542032 B3GALT4O96024 378 aa6.83□□□□□ -1.32
LEMD3-204ENST00000542032 TGFB1P01137 390 aa6.83□□□□□ -1.32
LEMD3-204ENST00000542032 MYRFLQ96LU7 910 aa6.83□□□□□ -1.32
LEMD3-204ENST00000542032 RUSC1Q9BVN2 902 aa6.83□□□□□ -1.32
LEMD3-204ENST00000542032 SUGCTQ9HAC7 445 aa6.83□□□□□ -1.32
LEMD3-204ENST00000542032 RAXQ9Y2V3 346 aa6.83□□□□□ -1.32
LEMD3-204ENST00000542032 TIAF1O95411 115 aa6.82□□□□□ -1.32
LEMD3-204ENST00000542032 MAPK1P28482 360 aa6.82□□□□□ -1.32
LEMD3-204ENST00000542032 PREPP48147 710 aa6.82□□□□□ -1.32
LEMD3-204ENST00000542032 GRM2Q14416 872 aa6.82□□□□□ -1.32
LEMD3-204ENST00000542032 ENOX2Q16206 610 aaKnown RBP6.82□□□□□ -1.32
LEMD3-204ENST00000542032 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.82□□□□□ -1.32
LEMD3-204ENST00000542032 SMG8Q8ND04 991 aaKnown RBP6.82□□□□□ -1.32
LEMD3-204ENST00000542032 EPS8L3Q8TE67 593 aaKnown RBP6.82□□□□□ -1.32
LEMD3-204ENST00000542032 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
LEMD3-204ENST00000542032 FMR1Q06787 632 aaKnown RBP eCLIP6.81□□□□□ -1.32
LEMD3-204ENST00000542032 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
LEMD3-204ENST00000542032 ASB16Q96NS5 453 aa6.81□□□□□ -1.32
LEMD3-204ENST00000542032 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
LEMD3-204ENST00000542032 TRAK1Q9UPV9 953 aa6.81□□□□□ -1.32
LEMD3-204ENST00000542032 PATL2C9JE40 543 aaKnown RBP6.8□□□□□ -1.32
LEMD3-204ENST00000542032 DHX15O43143 795 aaKnown RBP6.8□□□□□ -1.32
LEMD3-204ENST00000542032 CTSBP07858 339 aa6.8□□□□□ -1.32
LEMD3-204ENST00000542032 PLCB3Q01970 1234 aa6.8□□□□□ -1.32
LEMD3-204ENST00000542032 GSTM4Q03013 218 aa6.8□□□□□ -1.32
LEMD3-204ENST00000542032 EXOSC6Q5RKV6 272 aaKnown RBP6.8□□□□□ -1.32
LEMD3-204ENST00000542032 UTP4Q969X6 686 aaKnown RBP6.8□□□□□ -1.32
LEMD3-204ENST00000542032 HIF3AQ9Y2N7 669 aa6.8□□□□□ -1.32
LEMD3-204ENST00000542032 GADD45BO75293 160 aaPredicted RBP6.79□□□□□ -1.32
LEMD3-204ENST00000542032 PI16Q6UXB8 463 aa6.79□□□□□ -1.32
LEMD3-204ENST00000542032 FAM20CQ8IXL6 584 aa6.79□□□□□ -1.32
LEMD3-204ENST00000542032 USP26Q9BXU7 913 aa6.79□□□□□ -1.32
LEMD3-204ENST00000542032 PNMA6FA0A0J9YX94 578 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 CYP11A1P05108 521 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 SPINK2P20155 84 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 FAAP100Q0VG06 881 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 NUTM2GQ5VZR2 741 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 CLEC10AQ8IUN9 316 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 FAM83CQ9BQN1 747 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 C7orf69Q9H7B7 122 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 CYP4F12Q9HCS2 524 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
LEMD3-204ENST00000542032 GSC2O15499 205 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 IGLV1-40P01703 118 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 BMP3P12645 472 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 MAOBP27338 520 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 POU4F3Q15319 338 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 FDX2Q6P4F2 183 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 ZSCAN29Q8IWY8 852 aaPredicted RBP6.77□□□□□ -1.33
LEMD3-204ENST00000542032 FBF1Q8TES7 1133 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 NLRP2Q9NX02 1062 aa6.77□□□□□ -1.33
LEMD3-204ENST00000542032 SYNGAP1Q96PV0 1343 aa6.76□□□□□ -1.33
LEMD3-204ENST00000542032 SART1O43290 800 aaKnown RBP6.76□□□□□ -1.33
LEMD3-204ENST00000542032 ECEL1O95672 775 aa6.76□□□□□ -1.33
LEMD3-204ENST00000542032 XRCC5P13010 732 aaKnown RBP6.76□□□□□ -1.33
LEMD3-204ENST00000542032 SOX4Q06945 474 aaPredicted RBP6.76□□□□□ -1.33
LEMD3-204ENST00000542032 TRIM42Q8IWZ5 723 aa6.76□□□□□ -1.33
LEMD3-204ENST00000542032 HMX2A2RU54 273 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 WNT11O96014 354 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 NFIAQ12857 509 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 AP3B2Q13367 1082 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.75□□□□□ -1.33
LEMD3-204ENST00000542032 RNF43Q68DV7 783 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 ZDHHC13Q8IUH4 622 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 C12orf50Q8NA57 414 aaPredicted RBP6.75□□□□□ -1.33
LEMD3-204ENST00000542032 C2CD4AQ8NCU7 369 aaPredicted RBP6.75□□□□□ -1.33
LEMD3-204ENST00000542032 C3orf58Q8NDZ4 430 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 DDX54Q8TDD1 881 aaKnown RBP6.75□□□□□ -1.33
LEMD3-204ENST00000542032 GSX1Q9H4S2 264 aaPredicted RBP6.75□□□□□ -1.33
LEMD3-204ENST00000542032 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
LEMD3-204ENST00000542032 DRD2P14416 443 aa6.74□□□□□ -1.33
LEMD3-204ENST00000542032 SGO2Q562F6 1265 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms