RNA–Protein interactions for RNA: ENST00000532041.5

PICALM-218, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 3

Gene PICALM, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-218	ENST00000532041	IFIT1	P09914	478 aa	Known RBP	28.98	■■■□□ 2.23
PICALM-218	ENST00000532041	SREBF2	Q12772	1141 aa		28.98	■■■□□ 2.23
PICALM-218	ENST00000532041	TBC1D22A	Q8WUA7	517 aa		28.98	■■■□□ 2.23
PICALM-218	ENST00000532041	TEPSIN	Q96N21	525 aa		28.98	■■■□□ 2.23
PICALM-218	ENST00000532041	FRAT2	O75474	233 aa	Predicted RBP	28.97	■■■□□ 2.23
PICALM-218	ENST00000532041	USP2	O75604	605 aa	Predicted RBP	28.97	■■■□□ 2.23
PICALM-218	ENST00000532041	WNK4	Q96J92	1243 aa		28.97	■■■□□ 2.23
PICALM-218	ENST00000532041	LRRFIP2	Q9Y608	721 aa	Known RBP	28.97	■■■□□ 2.23
PICALM-218	ENST00000532041	TNFAIP1	Q13829	316 aa		28.96	■■■□□ 2.23
PICALM-218	ENST00000532041	CTU1	Q7Z7A3	348 aa	Known RBP	28.96	■■■□□ 2.23
PICALM-218	ENST00000532041	ZNF296	Q8WUU4	475 aa	Predicted RBP	28.96	■■■□□ 2.23
PICALM-218	ENST00000532041	SLC10A4	Q96EP9	437 aa		28.96	■■■□□ 2.23
PICALM-218	ENST00000532041	MEIS3	Q99687	375 aa		28.96	■■■□□ 2.23
PICALM-218	ENST00000532041	SIL1	Q9H173	461 aa		28.96	■■■□□ 2.23
PICALM-218	ENST00000532041	R3HDML	Q9H3Y0	253 aa		28.96	■■■□□ 2.23
PICALM-218	ENST00000532041	TCP10L2	B9ZVM9	353 aa		28.95	■■■□□ 2.22
PICALM-218	ENST00000532041	SLC5A1	P13866	664 aa		28.95	■■■□□ 2.22
PICALM-218	ENST00000532041	GJA5	P36382	358 aa		28.95	■■■□□ 2.22
PICALM-218	ENST00000532041	LPIN2	Q92539	896 aa		28.95	■■■□□ 2.22
PICALM-218	ENST00000532041	TMEM39B	Q9GZU3	492 aa		28.95	■■■□□ 2.22
PICALM-218	ENST00000532041	IREB2	P48200	963 aa	Known RBP	28.94	■■■□□ 2.22
PICALM-218	ENST00000532041	HDLBP	Q00341	1268 aa	Known RBP	28.94	■■■□□ 2.22
PICALM-218	ENST00000532041	ZBTB48	P10074	688 aa	Predicted RBP	28.93	■■■□□ 2.22
PICALM-218	ENST00000532041	RGS19	P49795	217 aa		28.93	■■■□□ 2.22
PICALM-218	ENST00000532041	CACNB3	P54284	484 aa		28.93	■■■□□ 2.22
PICALM-218	ENST00000532041	TEKT1	Q969V4	418 aa		28.93	■■■□□ 2.22
PICALM-218	ENST00000532041	CFHR5	Q9BXR6	569 aa		28.93	■■■□□ 2.22
PICALM-218	ENST00000532041	PA2G4	Q9UQ80	394 aa	Known RBP	28.93	■■■□□ 2.22
PICALM-218	ENST00000532041	MANSC4	A6NHS7	340 aa	Predicted RBP	28.92	■■■□□ 2.22
PICALM-218	ENST00000532041	UNCX	A6NJT0	531 aa		28.92	■■■□□ 2.22
PICALM-218	ENST00000532041	GPR25	O00155	361 aa		28.92	■■■□□ 2.22
PICALM-218	ENST00000532041	CIAO1	O76071	339 aa		28.92	■■■□□ 2.22
PICALM-218	ENST00000532041	NOM1	Q5C9Z4	860 aa	Known RBP	28.91	■■■□□ 2.22
PICALM-218	ENST00000532041	ZDHHC15	Q96MV8	337 aa		28.91	■■■□□ 2.22
PICALM-218	ENST00000532041	FBXO3	Q9UK99	471 aa		28.91	■■■□□ 2.22
PICALM-218	ENST00000532041	IGF2BP3	O00425	579 aa	Known RBP eCLIP	28.9	■■■□□ 2.22
PICALM-218	ENST00000532041	ATP2B3	Q16720	1220 aa		28.9	■■■□□ 2.22
PICALM-218	ENST00000532041	APOBEC3H	Q6NTF7	200 aa	Known RBP	28.9	■■■□□ 2.22
PICALM-218	ENST00000532041	IFNL1	Q8IU54	200 aa		28.9	■■■□□ 2.22
PICALM-218	ENST00000532041	ANKRD13A	Q8IZ07	590 aa		28.9	■■■□□ 2.22
PICALM-218	ENST00000532041	SUGT1	Q9Y2Z0	365 aa		28.9	■■■□□ 2.22
PICALM-218	ENST00000532041	INTS3	Q68E01	1043 aa	Known RBP	28.89	■■■□□ 2.22
PICALM-218	ENST00000532041	TNN	Q9UQP3	1299 aa		28.89	■■■□□ 2.22
PICALM-218	ENST00000532041	ARHGAP45	Q92619	1136 aa		28.88	■■■□□ 2.21
PICALM-218	ENST00000532041	MRI	Q9BWK5	157 aa		28.88	■■■□□ 2.21
PICALM-218	ENST00000532041	ELP3	Q9H9T3	547 aa		28.88	■■■□□ 2.21
PICALM-218	ENST00000532041	CEP126	Q9P2H0	1117 aa		28.88	■■■□□ 2.21
PICALM-218	ENST00000532041	MAST3	O60307	1309 aa		28.88	■■■□□ 2.21
PICALM-218	ENST00000532041	HTT	P42858	3142 aa		28.87	■■■□□ 2.21
PICALM-218	ENST00000532041	TNNI2	P48788	182 aa		28.87	■■■□□ 2.21
PICALM-218	ENST00000532041	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.87	■■■□□ 2.21
PICALM-218	ENST00000532041	COPRS	Q9NQ92	184 aa		28.87	■■■□□ 2.21
PICALM-218	ENST00000532041	IL15	P40933	162 aa	Predicted RBP	28.86	■■■□□ 2.21
PICALM-218	ENST00000532041	WDR66	Q8TBY9	1149 aa		28.86	■■■□□ 2.21
PICALM-218	ENST00000532041	CNKSR2	Q8WXI2	1034 aa		28.86	■■■□□ 2.21
PICALM-218	ENST00000532041	ALDH1A1	P00352	501 aa		28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	ADORA1	P30542	326 aa		28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	PHKA1	P46020	1223 aa		28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	INHBE	P58166	350 aa		28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	MLLT1	Q03111	559 aa	Predicted RBP	28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	HHIPL2	Q6UWX4	724 aa		28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	OPTN	Q96CV9	577 aa		28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	TNRC18	O15417	2968 aa	Predicted RBP	28.85	■■■□□ 2.21
PICALM-218	ENST00000532041	FKTN	O75072	461 aa		28.84	■■■□□ 2.21
PICALM-218	ENST00000532041	TRIM27	P14373	513 aa		28.84	■■■□□ 2.21
PICALM-218	ENST00000532041	PRDX5	P30044	214 aa		28.84	■■■□□ 2.21
PICALM-218	ENST00000532041	VGLL4	Q14135	290 aa		28.84	■■■□□ 2.21
PICALM-218	ENST00000532041	HPS5	Q9UPZ3	1129 aa		28.84	■■■□□ 2.21
PICALM-218	ENST00000532041	BCAR3	O75815	825 aa		28.83	■■■□□ 2.21
PICALM-218	ENST00000532041	SOX10	P56693	466 aa		28.83	■■■□□ 2.21
PICALM-218	ENST00000532041	DIXDC1	Q155Q3	683 aa		28.83	■■■□□ 2.21
PICALM-218	ENST00000532041	PTPN18	Q99952	460 aa		28.83	■■■□□ 2.21
PICALM-218	ENST00000532041	TMOD2	Q9NZR1	351 aa		28.83	■■■□□ 2.21
PICALM-218	ENST00000532041	HDAC5	Q9UQL6	1122 aa		28.83	■■■□□ 2.21
PICALM-218	ENST00000532041	DAGLA	Q9Y4D2	1042 aa		28.83	■■■□□ 2.21
PICALM-218	ENST00000532041	FKBP1C	Q5VVH2	108 aa		28.82	■■■□□ 2.2
PICALM-218	ENST00000532041	FAM83A	Q86UY5	434 aa		28.82	■■■□□ 2.2
PICALM-218	ENST00000532041	RPAP1	Q9BWH6	1393 aa	Predicted RBP	28.82	■■■□□ 2.2
PICALM-218	ENST00000532041	TESPA1	A2RU30	521 aa	Predicted RBP	28.81	■■■□□ 2.2
PICALM-218	ENST00000532041	GNAI3	P08754	354 aa		28.81	■■■□□ 2.2
PICALM-218	ENST00000532041	MAP3K9	P80192	1104 aa		28.81	■■■□□ 2.2
PICALM-218	ENST00000532041	MTX1	Q13505	466 aa		28.81	■■■□□ 2.2
PICALM-218	ENST00000532041	MS4A4A	Q96JQ5	239 aa		28.81	■■■□□ 2.2
PICALM-218	ENST00000532041	PKN2	Q16513	984 aa	Known RBP	28.8	■■■□□ 2.2
PICALM-218	ENST00000532041	SALL1	Q9NSC2	1324 aa		28.79	■■■□□ 2.2
PICALM-218	ENST00000532041	SRGAP3	O43295	1099 aa		28.79	■■■□□ 2.2
PICALM-218	ENST00000532041	ATF7IP	Q6VMQ6	1270 aa		28.79	■■■□□ 2.2
PICALM-218	ENST00000532041	GNL3L	Q9NVN8	582 aa	Known RBP	28.79	■■■□□ 2.2
PICALM-218	ENST00000532041	SNCAIP	Q9Y6H5	919 aa		28.79	■■■□□ 2.2
PICALM-218	ENST00000532041	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	28.79	■■■□□ 2.2
PICALM-218	ENST00000532041	CRHR2	Q13324	411 aa		28.78	■■■□□ 2.2
PICALM-218	ENST00000532041	CCDC102B	Q68D86	513 aa		28.78	■■■□□ 2.2
PICALM-218	ENST00000532041	BRI3BP	Q8WY22	251 aa		28.78	■■■□□ 2.2
PICALM-218	ENST00000532041	FRAT1	Q92837	279 aa	Predicted RBP	28.78	■■■□□ 2.2
PICALM-218	ENST00000532041	SEMA3E	O15041	775 aa		28.77	■■■□□ 2.2
PICALM-218	ENST00000532041	CDC42EP5	Q6NZY7	148 aa		28.77	■■■□□ 2.2
PICALM-218	ENST00000532041	CLUAP1	Q96AJ1	413 aa		28.77	■■■□□ 2.2
PICALM-218	ENST00000532041	DENND2A	Q9ULE3	1009 aa		28.77	■■■□□ 2.2
PICALM-218	ENST00000532041	CSAD	Q9Y600	493 aa		28.77	■■■□□ 2.2

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