RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 PTPN12Q05209 780 aaKnown RBP13.63□□□□□ -0.23
CCDC84-205ENST00000528088 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
CCDC84-205ENST00000528088 ZBTB40Q9NUA8 1239 aa13.63□□□□□ -0.23
CCDC84-205ENST00000528088 PODXL2Q9NZ53 605 aa13.63□□□□□ -0.23
CCDC84-205ENST00000528088 ZNF804BA4D1E1 1349 aa13.62□□□□□ -0.23
CCDC84-205ENST00000528088 PSMD14O00487 310 aa13.62□□□□□ -0.23
CCDC84-205ENST00000528088 HMMRO75330 724 aa13.62□□□□□ -0.23
CCDC84-205ENST00000528088 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
CCDC84-205ENST00000528088 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
CCDC84-205ENST00000528088 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
CCDC84-205ENST00000528088 G3BP1Q13283 466 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC84-205ENST00000528088 MTX1Q13505 466 aa13.62□□□□□ -0.23
CCDC84-205ENST00000528088 CEP85Q6P2H3 762 aa13.62□□□□□ -0.23
CCDC84-205ENST00000528088 MKRN1Q9UHC7 482 aaKnown RBP13.62□□□□□ -0.23
CCDC84-205ENST00000528088 LEMD3Q9Y2U8 911 aa13.62□□□□□ -0.23
CCDC84-205ENST00000528088 HIRAP54198 1017 aaPredicted RBP13.61□□□□□ -0.23
CCDC84-205ENST00000528088 COPRSQ9NQ92 184 aa13.61□□□□□ -0.23
CCDC84-205ENST00000528088 ECE2O60344 883 aa13.61□□□□□ -0.23
CCDC84-205ENST00000528088 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
CCDC84-205ENST00000528088 IL15P40933 162 aaPredicted RBP13.61□□□□□ -0.23
CCDC84-205ENST00000528088 TNIP1Q15025 636 aa13.61□□□□□ -0.23
CCDC84-205ENST00000528088 USP50Q70EL3 339 aaPredicted RBP13.61□□□□□ -0.23
CCDC84-205ENST00000528088 TRPM4Q8TD43 1214 aa13.61□□□□□ -0.23
CCDC84-205ENST00000528088 ADARB2Q9NS39 739 aaKnown RBP13.61□□□□□ -0.23
CCDC84-205ENST00000528088 CEP126Q9P2H0 1117 aa13.61□□□□□ -0.23
CCDC84-205ENST00000528088 RIPOR2Q9Y4F9 1068 aa13.61□□□□□ -0.23
CCDC84-205ENST00000528088 SNAP23O00161 211 aa13.6□□□□□ -0.23
CCDC84-205ENST00000528088 TRAF5O00463 557 aa13.6□□□□□ -0.23
CCDC84-205ENST00000528088 CIAO1O76071 339 aa13.6□□□□□ -0.23
CCDC84-205ENST00000528088 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
CCDC84-205ENST00000528088 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
CCDC84-205ENST00000528088 BCL11AQ9H165 835 aa13.6□□□□□ -0.23
CCDC84-205ENST00000528088 CNOT7Q9UIV1 285 aaKnown RBP13.6□□□□□ -0.23
CCDC84-205ENST00000528088 MED23Q9ULK4 1368 aa13.59□□□□□ -0.23
CCDC84-205ENST00000528088 TMEM88BA6NKF7 163 aa13.59□□□□□ -0.23
CCDC84-205ENST00000528088 VPS37DQ86XT2 251 aa13.59□□□□□ -0.23
CCDC84-205ENST00000528088 SSH3Q8TE77 659 aa13.59□□□□□ -0.23
CCDC84-205ENST00000528088 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
CCDC84-205ENST00000528088 PCNTO95613 3336 aa13.58□□□□□ -0.24
CCDC84-205ENST00000528088 APBB1O00213 710 aa13.58□□□□□ -0.24
CCDC84-205ENST00000528088 PDE8BO95263 885 aa13.58□□□□□ -0.24
CCDC84-205ENST00000528088 EGFRP00533 1210 aa13.58□□□□□ -0.24
CCDC84-205ENST00000528088 SLC5A1P13866 664 aa13.58□□□□□ -0.24
CCDC84-205ENST00000528088 PUM3Q15397 648 aaKnown RBP13.58□□□□□ -0.24
CCDC84-205ENST00000528088 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
CCDC84-205ENST00000528088 SAMD7Q7Z3H4 446 aa13.58□□□□□ -0.24
CCDC84-205ENST00000528088 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
CCDC84-205ENST00000528088 KLRK1P26718 216 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 TTLL12Q14166 644 aaPredicted RBP13.57□□□□□ -0.24
CCDC84-205ENST00000528088 ATP2B3Q16720 1220 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 DLK2Q6UY11 383 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 CNTNAP1P78357 1384 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 MYH13Q9UKX3 1938 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
CCDC84-205ENST00000528088 FRAT2O75474 233 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-205ENST00000528088 TFCP2Q12800 502 aa13.56□□□□□ -0.24
CCDC84-205ENST00000528088 CAVIN4Q5BKX8 364 aa13.56□□□□□ -0.24
CCDC84-205ENST00000528088 CST9Q5W186 159 aa13.56□□□□□ -0.24
CCDC84-205ENST00000528088 TXNRD3Q86VQ6 643 aa13.56□□□□□ -0.24
CCDC84-205ENST00000528088 SLC39A7Q92504 469 aa13.56□□□□□ -0.24
CCDC84-205ENST00000528088 DPF2Q92785 391 aa13.56□□□□□ -0.24
CCDC84-205ENST00000528088 GLIS2Q9BZE0 524 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-205ENST00000528088 SLC34A2O95436 690 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 VIL1P09327 827 aaKnown RBP13.55□□□□□ -0.24
CCDC84-205ENST00000528088 HSPA1AP0DMV8 641 aaKnown RBP13.55□□□□□ -0.24
CCDC84-205ENST00000528088 HSPA1BP0DMV9 641 aaKnown RBP13.55□□□□□ -0.24
CCDC84-205ENST00000528088 GYG1P46976 350 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 VEGFBP49765 207 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 TBC1D10BQ4KMP7 808 aaPredicted RBP13.55□□□□□ -0.24
CCDC84-205ENST00000528088 HSP90AB4PQ58FF6 505 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 LPIN2Q92539 896 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 NEUROD6Q96NK8 337 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 REPIN1Q9BWE0 567 aaKnown RBP13.55□□□□□ -0.24
CCDC84-205ENST00000528088 NPDC1Q9NQX5 325 aaPredicted RBP13.55□□□□□ -0.24
CCDC84-205ENST00000528088 PGAP2Q9UHJ9 254 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 AKAP2Q9Y2D5 859 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 H7C1D1 291 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 NEFLP07196 543 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 GORABQ5T7V8 394 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 ERC1Q8IUD2 1116 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 COA1Q9GZY4 146 aa13.55□□□□□ -0.24
CCDC84-205ENST00000528088 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
CCDC84-205ENST00000528088 AAMPQ13685 434 aa13.54□□□□□ -0.24
CCDC84-205ENST00000528088 PODNQ7Z5L7 613 aa13.54□□□□□ -0.24
CCDC84-205ENST00000528088 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
CCDC84-205ENST00000528088 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
CCDC84-205ENST00000528088 ABT1Q9ULW3 272 aaKnown RBP13.54□□□□□ -0.24
CCDC84-205ENST00000528088 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
CCDC84-205ENST00000528088 ASTN2O75129 1339 aaPredicted RBP13.53□□□□□ -0.24
CCDC84-205ENST00000528088 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
CCDC84-205ENST00000528088 A0A1B0GUL7 405 aa13.53□□□□□ -0.24
CCDC84-205ENST00000528088 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
CCDC84-205ENST00000528088 RPS12P25398 132 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms