RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 HMGXB3Q12766 1538 aa7.06□□□□□ -1.28
UBE2D3-230ENST00000510599 BAZ1BQ9UIG0 1483 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 PRDM2Q13029 1718 aa7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 GSTM4Q03013 218 aa7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 CDPF1Q6NVV7 123 aa7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 GTF3C2Q8WUA4 911 aaPredicted RBP7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 FBLIM1Q8WUP2 373 aa7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 TBC1D32Q96NH3 1257 aa7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 SERPINA10Q9UK55 444 aa7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 AMOTL2Q9Y2J4 779 aa7.05□□□□□ -1.28
UBE2D3-230ENST00000510599 CYP26A1O43174 497 aa7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 DLGAP3O95886 979 aa7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 DRD2P14416 443 aa7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 ZAR1Q86SH2 424 aa7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 TP53INP2Q8IXH6 220 aa7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 C2CD4AQ8NCU7 369 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 EZH1Q92800 747 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 FOXD3Q9UJU5 478 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-230ENST00000510599 SOX4Q06945 474 aaPredicted RBP7.03□□□□□ -1.28
UBE2D3-230ENST00000510599 BSDC1Q9NW68 430 aaPredicted RBP7.03□□□□□ -1.28
UBE2D3-230ENST00000510599 PRKAG2Q9UGJ0 569 aa7.03□□□□□ -1.28
UBE2D3-230ENST00000510599 MTMR7Q9Y216 660 aa7.03□□□□□ -1.28
UBE2D3-230ENST00000510599 FAM13AO94988 1023 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 ADH5P11766 374 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 FZD5Q13467 585 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 PEAR1Q5VY43 1037 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 CBLL1Q75N03 491 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 AGBL5Q8NDL9 886 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 ASIC4Q96FT7 647 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 LATS2Q9NRM7 1088 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 NCAPD3P42695 1498 aa7.02□□□□□ -1.29
UBE2D3-230ENST00000510599 NPR3P17342 541 aa7.01□□□□□ -1.29
UBE2D3-230ENST00000510599 CYP27A1Q02318 531 aa7.01□□□□□ -1.29
UBE2D3-230ENST00000510599 MTMR3Q13615 1198 aa7.01□□□□□ -1.29
UBE2D3-230ENST00000510599 MAP7Q14244 749 aa7.01□□□□□ -1.29
UBE2D3-230ENST00000510599 NRSN2Q9GZP1 204 aa7.01□□□□□ -1.29
UBE2D3-230ENST00000510599 ZFYVE1Q9HBF4 777 aa7.01□□□□□ -1.29
UBE2D3-230ENST00000510599 CYP11A1P05108 521 aa7□□□□□ -1.29
UBE2D3-230ENST00000510599 ADMP35318 185 aa7□□□□□ -1.29
UBE2D3-230ENST00000510599 DUSP27Q5VZP5 1158 aa7□□□□□ -1.29
UBE2D3-230ENST00000510599 SHISA5Q8N114 240 aa7□□□□□ -1.29
UBE2D3-230ENST00000510599 FLCNQ8NFG4 579 aa7□□□□□ -1.29
UBE2D3-230ENST00000510599 CLEC4MQ9H2X3 399 aaPredicted RBP7□□□□□ -1.29
UBE2D3-230ENST00000510599 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
UBE2D3-230ENST00000510599 ABCC8Q09428 1581 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 FAM170BA6NMN3 283 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 METTL12A8MUP2 240 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 JUNBP17275 347 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 RAB6AP20340 208 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 SSFA2P28290 1259 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 PCDH1Q08174 1060 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 SF3B2Q13435 895 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 OGFOD2Q6N063 350 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 NFXL1Q6ZNB6 911 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 GJD3Q8N144 294 aa6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 ARID1BQ8NFD5 2236 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-230ENST00000510599 A0A096LPE4 126 aa6.98□□□□□ -1.29
UBE2D3-230ENST00000510599 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
UBE2D3-230ENST00000510599 A0A1W2PPZ6 126 aa6.98□□□□□ -1.29
UBE2D3-230ENST00000510599 MAOBP27338 520 aa6.98□□□□□ -1.29
UBE2D3-230ENST00000510599 POU4F3Q15319 338 aa6.98□□□□□ -1.29
UBE2D3-230ENST00000510599 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
UBE2D3-230ENST00000510599 ZFYVE28Q9HCC9 887 aa6.98□□□□□ -1.29
UBE2D3-230ENST00000510599 FZD6O60353 706 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 ITGB5P18084 799 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 CCNJLQ8IV13 435 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 GATA6Q92908 595 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 CORO1BQ9BR76 489 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 LIN7BQ9HAP6 207 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 LRRC4CQ9HCJ2 640 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 RAD18Q9NS91 495 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 AP4E1Q9UPM8 1137 aa6.97□□□□□ -1.29
UBE2D3-230ENST00000510599 EEA1Q15075 1411 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 LOC105371045A0A1W2PR82 267 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 TMEM88BA6NKF7 163 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 NFICP08651 508 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 AKAP4Q5JQC9 854 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 ZNF765Q7L2R6 523 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 POU5F2Q8N7G0 328 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 SEMA6CQ9H3T2 930 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 PAK6Q9NQU5 681 aaPredicted RBP6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 ZC3H7BQ9UGR2 993 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 BIVM-ERCC5R4GMW8 1640 aa6.96□□□□□ -1.3
UBE2D3-230ENST00000510599 POLR3DP05423 398 aaPredicted RBP6.95□□□□□ -1.3
UBE2D3-230ENST00000510599 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBE2D3-230ENST00000510599 ZNF423Q2M1K9 1284 aa6.95□□□□□ -1.3
UBE2D3-230ENST00000510599 GALNT12Q8IXK2 581 aa6.95□□□□□ -1.3
UBE2D3-230ENST00000510599 A0A1W2PP55 124 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 CTSBP07858 339 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 GRIA4P48058 902 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 JAG1P78504 1218 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 TCF12Q99081 682 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 FAM105AQ9NUU6 356 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 CCDC87Q9NVE4 849 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 SYNJ1O43426 1573 aa6.94□□□□□ -1.3
UBE2D3-230ENST00000510599 WRNQ14191 1432 aaPredicted RBP eCLIP6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 B3GALT4O96024 378 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms