RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 MICALL1Q8N3F8 863 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 CHRDQ9H2X0 955 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 JPH1Q9HDC5 661 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 PREX2Q70Z35 1606 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 MADDQ8WXG6 1647 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 CDC42BPBQ9Y5S2 1711 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 C9orf84Q5VXU9 1444 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 TRAPPC8Q9Y2L5 1435 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 ABCC1P33527 1531 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 GPATCH8Q9UKJ3 1502 aaKnown RBP5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 LOC105371045A0A1W2PR82 267 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 RGS9O75916 674 aaPredicted RBP5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 APBA3O96018 575 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 ACPPP15309 386 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 ATP11AP98196 1134 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 C20orf204Q6ZNR8 217 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 SNX29Q8TEQ0 813 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 PLD4Q96BZ4 506 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 TRIM11Q96F44 468 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 SPACA7Q96KW9 195 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 CITED4Q96RK1 184 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 FAM129BQ96TA1 746 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 LPIN3Q9BQK8 851 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 RBCK1Q9BYM8 510 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 SMG9Q9H0W8 520 aaKnown RBP5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 MLH3Q9UHC1 1453 aa5.5□□□□□ -1.53
UBE2D3-226ENST00000508635 LILRB5O75023 590 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 TRPA1O75762 1119 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 IGHA2P01877 340 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 ELNP15502 786 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 MLECQ14165 292 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 USPL1Q5W0Q7 1092 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 NACC1Q96RE7 527 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 RBSNQ9H1K0 784 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 ZFYVE28Q9HCC9 887 aa5.49□□□□□ -1.53
UBE2D3-226ENST00000508635 KIAA1107Q9UPP5 1409 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 CDC42BPAQ5VT25 1732 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 ITSN2Q9NZM3 1697 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 SAMD9LQ8IVG5 1584 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 DIP2CQ9Y2E4 1556 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 MTUS2Q5JR59 1369 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 CCNB3Q8WWL7 1395 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 HOXD8P13378 290 aaPredicted RBP5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 HNRNPMP52272 730 aaKnown RBP eCLIP5.48□□□□□ -1.534e-13■■■■■ 32.7
UBE2D3-226ENST00000508635 TRIM26Q12899 539 aaPredicted RBP5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 PRRT3Q5FWE3 981 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 CEP135Q66GS9 1140 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 GDF6Q6KF10 455 aaPredicted RBP5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 ZSCAN29Q8IWY8 852 aaPredicted RBP5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 PMEPA1Q969W9 287 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 DMRTB1Q96MA1 342 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 RASSF4Q9H2L5 321 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 LATS2Q9NRM7 1088 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 CFDP1Q9UEE9 299 aaPredicted RBP5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 SALL4Q9UJQ4 1053 aa5.48□□□□□ -1.53
UBE2D3-226ENST00000508635 RIMS1Q86UR5 1692 aaKnown RBP5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 REREQ9P2R6 1566 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 LMTK3Q96Q04 1460 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 EIF1AYO14602 144 aaKnown RBP5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 KIF4AO95239 1232 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 AFF1P51825 1210 aaKnown RBP5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 PLCB3Q01970 1234 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 CEP120Q8N960 986 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 HHIPQ96QV1 700 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 PLVAPQ9BX97 442 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 FRRS1LQ9P0K9 344 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 TRIM33Q9UPN9 1127 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 AMOTL2Q9Y2J4 779 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 ABCA6Q8N139 1617 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 AGLP35573 1532 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 EHBP1L1Q8N3D4 1523 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 SYCP2Q9BX26 1530 aa5.47□□□□□ -1.53
UBE2D3-226ENST00000508635 PLEKHH2Q8IVE3 1493 aa5.46□□□□□ -1.53
UBE2D3-226ENST00000508635 CPNE3O75131 537 aaKnown RBP5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 NEFLP07196 543 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 MAPK8P45983 427 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 CEBPAP49715 358 aaPredicted RBP5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 TRAPPC3LQ5T215 181 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 DMRTC2Q8IXT2 367 aaPredicted RBP5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 ASB16Q96NS5 453 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 OSMRQ99650 979 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 LACRTQ9GZZ8 138 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 KIDINS220Q9ULH0 1771 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 VPS8Q8N3P4 1428 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 TIAM1Q13009 1591 aa5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 SPAG9O60271 1321 aaKnown RBP5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 ZNF644Q9H582 1327 aaPredicted RBP5.46□□□□□ -1.54
UBE2D3-226ENST00000508635 FER1L4A9Z1Z3 1794 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 FAM229AH3BQW9 127 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 TREHO43280 583 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 SMNDC1O75940 238 aaKnown RBP eCLIP5.45□□□□□ -1.543e-7■□□□□ 8.1
UBE2D3-226ENST00000508635 EDN3P14138 238 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 NID1P14543 1247 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 CDC25BP30305 580 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 DSC3Q14574 896 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 GRIK5Q16478 980 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 CCDC27Q2M243 656 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 ADAMTSL4Q6UY14 1074 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 CSRNP1Q96S65 589 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 ZKSCAN3Q9BRR0 538 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms