RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 INTS3Q68E01 1043 aaKnown RBP20.28■□□□□ 0.84
LMNA-222ENST00000508500 VPS37DQ86XT2 251 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 CDAN1Q8IWY9 1227 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 DZIP1LQ8IYY4 767 aaKnown RBP20.28■□□□□ 0.84
LMNA-222ENST00000508500 ARHGAP45Q92619 1136 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 SIL1Q9H173 461 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 PA2G4Q9UQ80 394 aaKnown RBP20.28■□□□□ 0.84
LMNA-222ENST00000508500 BCAR3O75815 825 aa20.27■□□□□ 0.84
LMNA-222ENST00000508500 TM4SF4P48230 202 aa20.27■□□□□ 0.84
LMNA-222ENST00000508500 CLMNQ96JQ2 1002 aa20.27■□□□□ 0.84
LMNA-222ENST00000508500 USP2O75604 605 aaPredicted RBP20.26■□□□□ 0.83
LMNA-222ENST00000508500 IFIT1P09914 478 aaKnown RBP20.26■□□□□ 0.83
LMNA-222ENST00000508500 TEPSINQ96N21 525 aa20.26■□□□□ 0.83
LMNA-222ENST00000508500 CIAO1O76071 339 aa20.25■□□□□ 0.83
LMNA-222ENST00000508500 SPRYD7Q5W111 196 aa20.25■□□□□ 0.83
LMNA-222ENST00000508500 TBC1D22AQ8WUA7 517 aa20.25■□□□□ 0.83
LMNA-222ENST00000508500 LPIN2Q92539 896 aa20.25■□□□□ 0.83
LMNA-222ENST00000508500 FBXO3Q9UK99 471 aa20.25■□□□□ 0.83
LMNA-222ENST00000508500 MYH2Q9UKX2 1941 aa20.25■□□□□ 0.83
LMNA-222ENST00000508500 AK9Q5TCS8 1911 aa20.24■□□□□ 0.83
LMNA-222ENST00000508500 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
LMNA-222ENST00000508500 SLC5A1P13866 664 aa20.24■□□□□ 0.83
LMNA-222ENST00000508500 TRIM27P14373 513 aa20.24■□□□□ 0.83
LMNA-222ENST00000508500 HDLBPQ00341 1268 aaKnown RBP20.24■□□□□ 0.83
LMNA-222ENST00000508500 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
LMNA-222ENST00000508500 CTU1Q7Z7A3 348 aaKnown RBP20.24■□□□□ 0.83
LMNA-222ENST00000508500 COPRSQ9NQ92 184 aa20.24■□□□□ 0.83
LMNA-222ENST00000508500 TCP10L2B9ZVM9 353 aa20.23■□□□□ 0.83
LMNA-222ENST00000508500 TBC1D8O95759 1140 aa20.23■□□□□ 0.83
LMNA-222ENST00000508500 SUPT20HL1Q3ZLR7 823 aa20.23■□□□□ 0.83
LMNA-222ENST00000508500 CFHR5Q9BXR6 569 aa20.23■□□□□ 0.83
LMNA-222ENST00000508500 HTTP42858 3142 aa20.23■□□□□ 0.83
LMNA-222ENST00000508500 PPP1R12BO60237 982 aaPredicted RBP20.22■□□□□ 0.83
LMNA-222ENST00000508500 CACNB3P54284 484 aa20.22■□□□□ 0.83
LMNA-222ENST00000508500 ATP2B3Q16720 1220 aa20.22■□□□□ 0.83
LMNA-222ENST00000508500 APOBEC3HQ6NTF7 200 aaKnown RBP20.22■□□□□ 0.83
LMNA-222ENST00000508500 MRIQ9BWK5 157 aa20.22■□□□□ 0.83
LMNA-222ENST00000508500 TMEM39BQ9GZU3 492 aa20.22■□□□□ 0.83
LMNA-222ENST00000508500 R3HDMLQ9H3Y0 253 aa20.22■□□□□ 0.83
LMNA-222ENST00000508500 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.22■□□□□ 0.83
LMNA-222ENST00000508500 CEP126Q9P2H0 1117 aa20.22■□□□□ 0.83
LMNA-222ENST00000508500 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.22■□□□□ 0.83
LMNA-222ENST00000508500 GJA5P36382 358 aa20.21■□□□□ 0.83
LMNA-222ENST00000508500 IL15P40933 162 aaPredicted RBP20.21■□□□□ 0.83
LMNA-222ENST00000508500 TEKT1Q969V4 418 aa20.21■□□□□ 0.83
LMNA-222ENST00000508500 SLC10A4Q96EP9 437 aa20.21■□□□□ 0.83
LMNA-222ENST00000508500 WNK4Q96J92 1243 aa20.21■□□□□ 0.83
LMNA-222ENST00000508500 ZDHHC15Q96MV8 337 aa20.21■□□□□ 0.83
LMNA-222ENST00000508500 ADORA1P30542 326 aa20.2■□□□□ 0.82
LMNA-222ENST00000508500 MTX1Q13505 466 aa20.2■□□□□ 0.82
LMNA-222ENST00000508500 TNFAIP1Q13829 316 aa20.2■□□□□ 0.82
LMNA-222ENST00000508500 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
LMNA-222ENST00000508500 FRAT1Q92837 279 aaPredicted RBP20.2■□□□□ 0.82
LMNA-222ENST00000508500 SUGT1Q9Y2Z0 365 aa20.2■□□□□ 0.82
LMNA-222ENST00000508500 GNAI3P08754 354 aa20.19■□□□□ 0.82
LMNA-222ENST00000508500 PHKA1P46020 1223 aa20.19■□□□□ 0.82
LMNA-222ENST00000508500 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
LMNA-222ENST00000508500 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
LMNA-222ENST00000508500 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
LMNA-222ENST00000508500 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 PRDX5P30044 214 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 IREB2P48200 963 aaKnown RBP20.18■□□□□ 0.82
LMNA-222ENST00000508500 SOX10P56693 466 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 SREBF2Q12772 1141 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 HHIPL2Q6UWX4 724 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 ANKRD13AQ8IZ07 590 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 WDR66Q8TBY9 1149 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 HPS5Q9UPZ3 1129 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 HDAC5Q9UQL6 1122 aa20.18■□□□□ 0.82
LMNA-222ENST00000508500 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
LMNA-222ENST00000508500 SRGAP3O43295 1099 aa20.17■□□□□ 0.82
LMNA-222ENST00000508500 ZBTB48P10074 688 aaPredicted RBP20.17■□□□□ 0.82
LMNA-222ENST00000508500 TIMM10P62072 90 aa20.17■□□□□ 0.82
LMNA-222ENST00000508500 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
LMNA-222ENST00000508500 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 MANSC4A6NHS7 340 aaPredicted RBP20.16■□□□□ 0.82
LMNA-222ENST00000508500 GPR25O00155 361 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 IGF2BP3O00425 579 aaKnown RBP eCLIP20.16■□□□□ 0.82
LMNA-222ENST00000508500 ZBTB22O15209 634 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 TNNI2P48788 182 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 DIXDC1Q155Q3 683 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 PKN2Q16513 984 aaKnown RBP20.16■□□□□ 0.82
LMNA-222ENST00000508500 CCDC102BQ68D86 513 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 IFNL1Q8IU54 200 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 TMEM57Q8N5G2 664 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 MAST3O60307 1309 aa20.16■□□□□ 0.82
LMNA-222ENST00000508500 MYO5AQ9Y4I1 1855 aaKnown RBP20.16■□□□□ 0.82
LMNA-222ENST00000508500 TFCP2Q12800 502 aa20.15■□□□□ 0.82
LMNA-222ENST00000508500 CNKSR2Q8WXI2 1034 aa20.15■□□□□ 0.82
LMNA-222ENST00000508500 ELP3Q9H9T3 547 aa20.15■□□□□ 0.82
LMNA-222ENST00000508500 DAGLAQ9Y4D2 1042 aa20.15■□□□□ 0.82
LMNA-222ENST00000508500 RBBP6Q7Z6E9 1792 aaKnown RBP20.15■□□□□ 0.82
LMNA-222ENST00000508500 SALL1Q9NSC2 1324 aa20.14■□□□□ 0.81
LMNA-222ENST00000508500 FKBP1CQ5VVH2 108 aa20.14■□□□□ 0.81
LMNA-222ENST00000508500 FAM83AQ86UY5 434 aa20.14■□□□□ 0.81
LMNA-222ENST00000508500 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.14■□□□□ 0.81
LMNA-222ENST00000508500 PTPN18Q99952 460 aa20.14■□□□□ 0.81
LMNA-222ENST00000508500 A0A1B0GUL7 405 aa20.13■□□□□ 0.81
LMNA-222ENST00000508500 TESPA1A2RU30 521 aaPredicted RBP20.13■□□□□ 0.81
LMNA-222ENST00000508500 SEMA3EO15041 775 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms