RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CERS3Q8IU89 383 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 IQUBQ8NA54 791 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TCHPQ9BT92 498 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TM6SF1Q9BZW5 370 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TRIM4Q9C037 500 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 ZRANB1Q9UGI0 708 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 PPP2R2CQ9Y2T4 447 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 SNX14Q9Y5W7 946 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 SAR1BQ9Y6B6 198 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 CUL7Q14999 1698 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 LRMPQ12912 555 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 CFAP221Q4G0U5 840 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 VWA3BQ502W6 1294 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 GKAP1Q5VSY0 366 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 VSIG1Q86XK7 387 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TCEANC2Q96MN5 208 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 NOX5Q96PH1 765 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 UTP11Q9Y3A2 253 aaKnown RBP8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 SOS1Q07889 1333 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 PER1O15534 1290 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 CUTAO60888 179 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TRHP20396 242 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 SRGAP1Q7Z6B7 1085 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 CCDC82Q8N4S0 544 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TSNARE1Q96NA8 513 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 ACTR5Q9H9F9 607 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 WWC3Q9ULE0 1092 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TTC21AQ8NDW8 1320 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 MINDY4BA8MYZ0 360 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 PRC1O43663 620 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 SLMAPQ14BN4 828 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 LONRF2Q1L5Z9 754 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 AMOTQ4VCS5 1084 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 ANO1Q5XXA6 986 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 ARMC9Q7Z3E5 817 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 AFAP1Q8N556 730 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 MYD88Q99836 296 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 UBA5Q9GZZ9 404 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 FAM204AQ9H8W3 233 aa8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.21□□□□□ -1.09
UBE2D3-224ENST00000508474 WTAPQ15007 396 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 PPP2R5AQ15172 486 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 RTN1Q16799 776 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 CEP120Q8N960 986 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 ZNF526Q8TF50 670 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 MORC2Q9Y6X9 1032 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 SNAPC4Q5SXM2 1469 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 PEG3Q9GZU2 1588 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 CCT5P48643 541 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 STX17P56962 302 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 PHLDB3Q6NSJ2 640 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 PPP1R13BQ96KQ4 1090 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 HDAC9Q9UKV0 1011 aa8.21□□□□□ -1.1
UBE2D3-224ENST00000508474 CASQ2O14958 399 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 TNIP1Q15025 636 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 MCUR1Q96AQ8 359 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 DNAI2Q9GZS0 605 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 CWC25Q9NXE8 425 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 MYO1AQ9UBC5 1043 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 COL17A1Q9UMD9 1497 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 SYNRGQ9UMZ2 1314 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 STX10O60499 249 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 RANBP6O60518 1105 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 ZNF202O95125 648 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 ATP2A2P16615 1042 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 CLCN6P51797 869 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 MTX1Q13505 466 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 PPP1R7Q15435 360 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 RILPL1Q5EBL4 403 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 LRRC2Q9BYS8 371 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 VCX3AQ9NNX9 186 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 CDC23Q9UJX2 597 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 KCNH3Q9ULD8 1083 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 SGSM2O43147 1006 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 RNF40O75150 1001 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 IGHMBP2P38935 993 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 IRX4P78413 519 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 PDLIM2Q96JY6 352 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 RGS12O14924 1447 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 ERBB4Q15303 1308 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 SMIM23A6NLE4 172 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 PNMA6AP0CW24 399 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 ZC3H6P61129 1189 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 ASIC1P78348 528 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 NCBP1Q09161 790 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 MUM1Q2TAK8 710 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 NUDT16Q96DE0 195 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
UBE2D3-224ENST00000508474 CETN3O15182 167 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 HAND2P61296 217 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 APOBRQ0VD83 1088 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 ATP2B3Q16720 1220 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 TADA2BQ86TJ2 420 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 RPUSD2Q8IZ73 545 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 MAP3K2Q9Y2U5 619 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 RABGAP1Q9Y3P9 1069 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 UHRF1BP1Q6BDS2 1440 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 SLC5A1P13866 664 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms