RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 CRKP46108 304 aa17.84■□□□□ 0.45
POLR2J3-207ENST00000503564 CRHR2Q13324 411 aa17.84■□□□□ 0.45
POLR2J3-207ENST00000503564 FBXO33Q7Z6M2 555 aa17.84■□□□□ 0.45
POLR2J3-207ENST00000503564 VGLL2Q8N8G2 317 aa17.84■□□□□ 0.45
POLR2J3-207ENST00000503564 PTPN18Q99952 460 aa17.84■□□□□ 0.45
POLR2J3-207ENST00000503564 TRIM17Q9Y577 477 aa17.84■□□□□ 0.45
POLR2J3-207ENST00000503564 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
POLR2J3-207ENST00000503564 FAM9BQ8IZU0 186 aa17.83■□□□□ 0.44
POLR2J3-207ENST00000503564 ELP3Q9H9T3 547 aa17.83■□□□□ 0.44
POLR2J3-207ENST00000503564 CAP1Q01518 475 aa17.82■□□□□ 0.44
POLR2J3-207ENST00000503564 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.82■□□□□ 0.44
POLR2J3-207ENST00000503564 MRPL50Q8N5N7 158 aaKnown RBP17.82■□□□□ 0.44
POLR2J3-207ENST00000503564 OPTNQ96CV9 577 aa17.82■□□□□ 0.44
POLR2J3-207ENST00000503564 MS4A4AQ96JQ5 239 aa17.82■□□□□ 0.44
POLR2J3-207ENST00000503564 TMEM39BQ9GZU3 492 aa17.82■□□□□ 0.44
POLR2J3-207ENST00000503564 IQSEC3Q9UPP2 1182 aaPredicted RBP17.82■□□□□ 0.44
POLR2J3-207ENST00000503564 ZNF316A6NFI3 1004 aaPredicted RBP17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 TCP10L2B9ZVM9 353 aa17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 OTUD7BQ6GQQ9 843 aa17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 CD99L2Q8TCZ2 262 aa17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 ERO1AQ96HE7 468 aa17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 KIAA0100Q14667 2235 aaKnown RBP17.81■□□□□ 0.44
POLR2J3-207ENST00000503564 HDLBPQ00341 1268 aaKnown RBP17.8■□□□□ 0.44
POLR2J3-207ENST00000503564 CHAF1AQ13111 956 aaPredicted RBP17.8■□□□□ 0.44
POLR2J3-207ENST00000503564 VGLL4Q14135 290 aa17.8■□□□□ 0.44
POLR2J3-207ENST00000503564 METTL24Q5JXM2 366 aa17.8■□□□□ 0.44
POLR2J3-207ENST00000503564 PTPN22Q9Y2R2 807 aa17.8■□□□□ 0.44
POLR2J3-207ENST00000503564 PTPRCP08575 1304 aa17.79■□□□□ 0.44
POLR2J3-207ENST00000503564 PDE8BO95263 885 aa17.79■□□□□ 0.44
POLR2J3-207ENST00000503564 TNNI2P48788 182 aa17.79■□□□□ 0.44
POLR2J3-207ENST00000503564 VPS37DQ86XT2 251 aa17.79■□□□□ 0.44
POLR2J3-207ENST00000503564 KLHDC4Q8TBB5 520 aa17.79■□□□□ 0.44
POLR2J3-207ENST00000503564 TBC1D22AQ8WUA7 517 aa17.79■□□□□ 0.44
POLR2J3-207ENST00000503564 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
POLR2J3-207ENST00000503564 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
POLR2J3-207ENST00000503564 ZSWIM8A7E2V4 1837 aa17.78■□□□□ 0.44
POLR2J3-207ENST00000503564 POTEFA5A3E0 1075 aa17.78■□□□□ 0.44
POLR2J3-207ENST00000503564 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
POLR2J3-207ENST00000503564 FGFR2P21802 821 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 BCAMP50895 628 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 CACNB3P54284 484 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 MAP3K9P80192 1104 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 SP3Q02447 781 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 CAVIN4Q5BKX8 364 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 ARMC5Q96C12 935 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 ZDHHC15Q96MV8 337 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 USP44Q9H0E7 712 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 EFCC1Q9HA90 598 aa17.77■□□□□ 0.44
POLR2J3-207ENST00000503564 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.43
POLR2J3-207ENST00000503564 CCL15-CCL14A0A0B4J2E2 113 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 SPDYE5A6NIY4 337 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 GTF2A2P52657 109 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 CCL15Q16663 113 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 APOBEC3HQ6NTF7 200 aaKnown RBP17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 MRIQ9BWK5 157 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 PCDH10Q9P2E7 1040 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 SNCAIPQ9Y6H5 919 aa17.76■□□□□ 0.43
POLR2J3-207ENST00000503564 PUM3Q15397 648 aaKnown RBP17.75■□□□□ 0.43
POLR2J3-207ENST00000503564 FAM83AQ86UY5 434 aa17.75■□□□□ 0.43
POLR2J3-207ENST00000503564 OTUD5Q96G74 571 aa17.75■□□□□ 0.43
POLR2J3-207ENST00000503564 SUGT1Q9Y2Z0 365 aa17.75■□□□□ 0.43
POLR2J3-207ENST00000503564 CSADQ9Y600 493 aa17.75■□□□□ 0.43
POLR2J3-207ENST00000503564 MAST3O60307 1309 aa17.74■□□□□ 0.43
POLR2J3-207ENST00000503564 FRAT2O75474 233 aaPredicted RBP17.74■□□□□ 0.43
POLR2J3-207ENST00000503564 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
POLR2J3-207ENST00000503564 TAF1CQ15572 869 aaPredicted RBP17.74■□□□□ 0.43
POLR2J3-207ENST00000503564 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
POLR2J3-207ENST00000503564 E9PSI1 815 aa17.73■□□□□ 0.43
POLR2J3-207ENST00000503564 IFIT1P09914 478 aaKnown RBP17.73■□□□□ 0.43
POLR2J3-207ENST00000503564 HHIPL2Q6UWX4 724 aa17.73■□□□□ 0.43
POLR2J3-207ENST00000503564 ZFYVE28Q9HCC9 887 aa17.73■□□□□ 0.43
POLR2J3-207ENST00000503564 TMOD2Q9NZR1 351 aa17.73■□□□□ 0.43
POLR2J3-207ENST00000503564 EYA2O00167 538 aa17.72■□□□□ 0.43
POLR2J3-207ENST00000503564 ERO1BQ86YB8 467 aa17.72■□□□□ 0.43
POLR2J3-207ENST00000503564 WRNIP1Q96S55 665 aa17.72■□□□□ 0.43
POLR2J3-207ENST00000503564 CENPFP49454 3210 aa17.72■□□□□ 0.43
POLR2J3-207ENST00000503564 SLFN5Q08AF3 891 aa17.71■□□□□ 0.43
POLR2J3-207ENST00000503564 ATG9AQ7Z3C6 839 aa17.71■□□□□ 0.43
POLR2J3-207ENST00000503564 ZKSCAN4Q969J2 545 aaPredicted RBP17.71■□□□□ 0.43
POLR2J3-207ENST00000503564 ZNF333Q96JL9 665 aa17.71■□□□□ 0.43
POLR2J3-207ENST00000503564 MKI67P46013 3256 aaKnown RBP17.71■□□□□ 0.42
POLR2J3-207ENST00000503564 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 IRF6O14896 467 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 CETPP11597 493 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 SLC5A1P13866 664 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 PPIL2Q13356 520 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 LPIN2Q92539 896 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 ZCCHC17Q9NP64 241 aaKnown RBP17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 PTCH2Q9Y6C5 1203 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 BRCA2P51587 3418 aa17.7■□□□□ 0.42
POLR2J3-207ENST00000503564 BTBD19C9JJ37 291 aa17.69■□□□□ 0.42
POLR2J3-207ENST00000503564 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
POLR2J3-207ENST00000503564 DCAF15Q66K64 600 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms