RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SIRT1Q96EB6 747 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 TRIM75PA6NK02 468 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 IGHMBP2P38935 993 aaKnown RBP19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 EYA1Q99502 592 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 TPCN1Q9ULQ1 816 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 AKAP4Q5JQC9 854 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 TCP11L1Q9NUJ3 509 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 YEATS2Q9ULM3 1422 aa19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 LUC7L2Q9Y383 392 aaKnown RBP19.52■□□□□ 0.72
HMGXB3-201ENST00000502717 DRC1Q96MC2 740 aa19.52■□□□□ 0.71
HMGXB3-201ENST00000502717 KRT23Q9C075 422 aa19.52■□□□□ 0.71
HMGXB3-201ENST00000502717 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 STX17P56962 302 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 CNNM2Q9H8M5 875 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 PSMA7O14818 248 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 INPP5BP32019 993 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 TRIM14Q14142 442 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 KCNH3Q9ULD8 1083 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 WTAPQ15007 396 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 RTN1Q16799 776 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 C8orf37Q96NL8 207 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 GOPCQ9HD26 462 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 ZEB2O60315 1214 aa19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 CWF19L2Q2TBE0 894 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 ZSCAN29Q8IWY8 852 aaPredicted RBP19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 LSG1Q9H089 658 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 SEPT11Q9NVA2 429 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-201ENST00000502717 ZBTB9Q96C00 473 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 RAB34Q9BZG1 259 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 RANBP6O60518 1105 aaKnown RBP19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 CCDC122Q5T0U0 273 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 CCDC42Q96M95 316 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 KIF2CQ99661 725 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 ABCF2Q9UG63 623 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 UBXN1Q04323 297 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 IFI16Q16666 785 aaKnown RBP19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 CEP57Q86XR8 500 aa19.5■□□□□ 0.71
HMGXB3-201ENST00000502717 GOLGA6CA6NDK9 693 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 CUTAO60888 179 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 HOXB7P09629 217 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 GOLGA6DP0CG33 693 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 PTH1RQ03431 593 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 CCDC114Q96M63 670 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 GOLGA6AQ9NYA3 693 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 WWC2Q6AWC2 1192 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 TMTC1Q8IUR5 882 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 XAGE3Q8WTP9 111 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 PPP1R13BQ96KQ4 1090 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 SNRPA1P09661 255 aaKnown RBP19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 MTX1Q13505 466 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 CYP26C1Q6V0L0 522 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 TMEM2Q9UHN6 1383 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 FCHSD1Q86WN1 690 aa19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
HMGXB3-201ENST00000502717 TMCO5BA8MYB1 307 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 NDUFAB1O14561 156 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 CYP2E1P05181 493 aaPredicted RBP19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 CFAP58Q5T655 872 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 LMBR1LQ6UX01 489 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 RASEFQ8IZ41 740 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 RABGGTAQ92696 567 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 JARID2Q92833 1246 aaPredicted RBP19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 NFE2L3Q9Y4A8 694 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 COPS6Q7L5N1 327 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 NCOA5Q9HCD5 579 aaKnown RBP19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 RBM6P78332 1123 aaKnown RBP19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 TFCP2Q12800 502 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 TAOK3Q9H2K8 898 aa19.48■□□□□ 0.71
HMGXB3-201ENST00000502717 ATP2C2O75185 946 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 MSL1Q68DK7 614 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 ARAP3Q8WWN8 1544 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 C19orf44Q9H6X5 657 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 PPP2R2CQ9Y2T4 447 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 PTCH1Q13635 1447 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 STAT6P42226 847 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 CCDC129Q6ZRS4 1044 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 LRRC59Q96AG4 307 aaKnown RBP19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 ZDHHC9Q9Y397 364 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 ANKRD18BA2A2Z9 1011 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 PPP1R12BO60237 982 aaPredicted RBP19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 SLC5A1P13866 664 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 HOXC9P31274 260 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 USP28Q96RU2 1077 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
HMGXB3-201ENST00000502717 POLD1P28340 1107 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 CALML4Q96GE6 196 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 EXOC1Q9NV70 894 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 NBPF7P0C2Y1 421 aaPredicted RBP19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 NOP2P46087 812 aaKnown RBP19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 TMEM266Q2M3C6 531 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 RILPL1Q5EBL4 403 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 FBXO38Q6PIJ6 1188 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 ANKS4BQ8N8V4 417 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 PLEKHG3A1L390 1219 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 CCDC40Q4G0X9 1142 aa19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 TEX13AQ9BXU3 409 aaPredicted RBP19.46■□□□□ 0.71
HMGXB3-201ENST00000502717 TSGA10Q9BZW7 698 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms