RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 NFICP08651 508 aa6.62□□□□□ -1.35
PHC3-216ENST00000497171 DNM1Q05193 864 aaKnown RBP6.62□□□□□ -1.35
PHC3-216ENST00000497171 ATG4DQ86TL0 474 aaPredicted RBP6.62□□□□□ -1.35
PHC3-216ENST00000497171 C14orf37Q86TY3 774 aa6.62□□□□□ -1.35
PHC3-216ENST00000497171 EDEM1Q92611 657 aa6.62□□□□□ -1.35
PHC3-216ENST00000497171 ZKSCAN3Q9BRR0 538 aa6.62□□□□□ -1.35
PHC3-216ENST00000497171 RAD18Q9NS91 495 aa6.62□□□□□ -1.35
PHC3-216ENST00000497171 ESRRAP11474 423 aaPredicted RBP6.61□□□□□ -1.35
PHC3-216ENST00000497171 CYP27C1Q4G0S4 372 aa6.61□□□□□ -1.35
PHC3-216ENST00000497171 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
PHC3-216ENST00000497171 CAPN12Q6ZSI9 719 aa6.61□□□□□ -1.35
PHC3-216ENST00000497171 DYMQ7RTS9 669 aa6.61□□□□□ -1.35
PHC3-216ENST00000497171 ATCAYQ86WG3 371 aa6.61□□□□□ -1.35
PHC3-216ENST00000497171 RC3H2Q9HBD1 1191 aaKnown RBP6.61□□□□□ -1.35
PHC3-216ENST00000497171 ACTL7BQ9Y614 415 aa6.61□□□□□ -1.35
PHC3-216ENST00000497171 PHACTR2O75167 634 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 DLGAP3O95886 979 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 CYP11A1P05108 521 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 DDX54Q8TDD1 881 aaKnown RBP6.6□□□□□ -1.35
PHC3-216ENST00000497171 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 TMEM40Q8WWA1 233 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 GATA6Q92908 595 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 BHLHE41Q9C0J9 482 aaPredicted RBP6.6□□□□□ -1.35
PHC3-216ENST00000497171 ZMIZ1Q9ULJ6 1067 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 AP4E1Q9UPM8 1137 aa6.6□□□□□ -1.35
PHC3-216ENST00000497171 AKAP4Q5JQC9 854 aa6.59□□□□□ -1.35
PHC3-216ENST00000497171 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.35
PHC3-216ENST00000497171 ERICH6Q7L0X2 663 aa6.59□□□□□ -1.35
PHC3-216ENST00000497171 SNX29Q8TEQ0 813 aa6.59□□□□□ -1.35
PHC3-216ENST00000497171 SEMA6CQ9H3T2 930 aa6.59□□□□□ -1.35
PHC3-216ENST00000497171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.59□□□□□ -1.35
PHC3-216ENST00000497171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
PHC3-216ENST00000497171 PDGFAP04085 211 aa6.58□□□□□ -1.36
PHC3-216ENST00000497171 MZF1P28698 734 aaPredicted RBP6.58□□□□□ -1.36
PHC3-216ENST00000497171 FAM69CQ0P6D2 419 aa6.58□□□□□ -1.36
PHC3-216ENST00000497171 NOM1Q5C9Z4 860 aaKnown RBP6.58□□□□□ -1.36
PHC3-216ENST00000497171 DAGLAQ9Y4D2 1042 aa6.58□□□□□ -1.36
PHC3-216ENST00000497171 ASPAP45381 313 aa6.57□□□□□ -1.36
PHC3-216ENST00000497171 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
PHC3-216ENST00000497171 OGFOD3Q6PK18 319 aa6.57□□□□□ -1.36
PHC3-216ENST00000497171 PI4K2BQ8TCG2 481 aa6.57□□□□□ -1.36
PHC3-216ENST00000497171 NETO1Q8TDF5 533 aa6.57□□□□□ -1.36
PHC3-216ENST00000497171 CLP1Q92989 425 aaKnown RBP6.57□□□□□ -1.36
PHC3-216ENST00000497171 CHRDQ9H2X0 955 aa6.57□□□□□ -1.36
PHC3-216ENST00000497171 CARMIL2Q6F5E8 1435 aa6.57□□□□□ -1.36
PHC3-216ENST00000497171 EREGO14944 169 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 FUT4P22083 530 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 MAOBP27338 520 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 EHHADHQ08426 723 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 POU4F3Q15319 338 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 ALKBH2Q6NS38 261 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 ARHGAP27Q6ZUM4 889 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 SPRED2Q7Z698 418 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 HELQQ8TDG4 1101 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 FAM84AQ96KN4 292 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 CORO1BQ9BR76 489 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 GGNBP2Q9H3C7 697 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 ACSS3Q9H6R3 686 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 FAM105AQ9NUU6 356 aa6.56□□□□□ -1.36
PHC3-216ENST00000497171 HNRNPUQ00839 825 aaKnown RBP eCLIP6.55□□□□□ -1.36
PHC3-216ENST00000497171 PCDH1Q08174 1060 aa6.55□□□□□ -1.36
PHC3-216ENST00000497171 BHLHE22Q8NFJ8 381 aaPredicted RBP6.55□□□□□ -1.36
PHC3-216ENST00000497171 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
PHC3-216ENST00000497171 CLEC4MQ9H2X3 399 aaPredicted RBP6.55□□□□□ -1.36
PHC3-216ENST00000497171 A6NHS1 94 aa6.54□□□□□ -1.36
PHC3-216ENST00000497171 USP5P45974 858 aa6.54□□□□□ -1.36
PHC3-216ENST00000497171 AAMPQ13685 434 aa6.54□□□□□ -1.36
PHC3-216ENST00000497171 TMEM164Q5U3C3 297 aa6.54□□□□□ -1.36
PHC3-216ENST00000497171 GLIS3Q8NEA6 775 aa6.54□□□□□ -1.36
PHC3-216ENST00000497171 FAM53CQ9NYF3 392 aa6.54□□□□□ -1.36
PHC3-216ENST00000497171 AMOTL2Q9Y2J4 779 aa6.54□□□□□ -1.36
PHC3-216ENST00000497171 LRRC10BA6NIK2 292 aa6.53□□□□□ -1.36
PHC3-216ENST00000497171 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
PHC3-216ENST00000497171 ATP2B4P23634 1241 aa6.53□□□□□ -1.36
PHC3-216ENST00000497171 BNIP3Q12983 259 aa6.53□□□□□ -1.36
PHC3-216ENST00000497171 ZSCAN18Q8TBC5 510 aaPredicted RBP6.53□□□□□ -1.36
PHC3-216ENST00000497171 SEPT3Q9UH03 358 aa6.53□□□□□ -1.36
PHC3-216ENST00000497171 VAV3Q9UKW4 847 aa6.53□□□□□ -1.36
PHC3-216ENST00000497171 ATG7O95352 703 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
PHC3-216ENST00000497171 CD8BP10966 210 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 RAP1GAPP47736 663 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 EIF1AXP47813 144 aaKnown RBP6.52□□□□□ -1.37
PHC3-216ENST00000497171 PRKCQQ04759 706 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 PDE3AQ14432 1141 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 ANGEL2Q5VTE6 544 aaKnown RBP6.52□□□□□ -1.37
PHC3-216ENST00000497171 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 NRSN2Q9GZP1 204 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 PIDD1Q9HB75 910 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 LGR6Q9HBX8 967 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 C1GALT1Q9NS00 363 aa6.52□□□□□ -1.37
PHC3-216ENST00000497171 ZNF777Q9ULD5 760 aaPredicted RBP6.52□□□□□ -1.37
PHC3-216ENST00000497171 IFI16Q16666 785 aaKnown RBP6.51□□□□□ -1.37
PHC3-216ENST00000497171 PLD6Q8N2A8 252 aaKnown RBP6.51□□□□□ -1.37
PHC3-216ENST00000497171 LRRN4CLQ8ND94 238 aa6.51□□□□□ -1.37
PHC3-216ENST00000497171 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
PHC3-216ENST00000497171 MBNL3Q9NUK0 354 aaKnown RBP6.51□□□□□ -1.37
PHC3-216ENST00000497171 A0A096LPE4 126 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms