RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 RGPD8O14715 1765 aaPredicted RBP15.56■□□□□ 0.08
GPC1-209ENST00000495100 SPATA31D1Q6ZQQ2 1576 aa15.56■□□□□ 0.08
GPC1-209ENST00000495100 TECPR2O15040 1411 aa15.56■□□□□ 0.08
GPC1-209ENST00000495100 ATP6V1AP38606 617 aa15.56■□□□□ 0.08
GPC1-209ENST00000495100 MCAMP43121 646 aa15.56■□□□□ 0.08
GPC1-209ENST00000495100 UBASH3AP57075 661 aa15.56■□□□□ 0.08
GPC1-209ENST00000495100 PIGBQ92521 554 aa15.56■□□□□ 0.08
GPC1-209ENST00000495100 PFKFB2O60825 505 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 CYP7A1P22680 504 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 ZMYM1Q5SVZ6 1142 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 KRT40Q6A162 431 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 CABP5Q9NP86 173 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 ITSN1Q15811 1721 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 DIP2BQ9P265 1576 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 FOXN1O15353 648 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 NR5A1Q13285 461 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 TCIRG1Q13488 830 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 ELF2Q15723 593 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 LONRF3Q496Y0 759 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 MFSD6Q6ZSS7 791 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 TRIM22Q8IYM9 498 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 CCDC191Q8NCU4 936 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 DHX58Q96C10 678 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 PIH1D3Q9NQM4 214 aaKnown RBP15.55■□□□□ 0.08
GPC1-209ENST00000495100 KIF28PB7ZC32 967 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 EXOC5O00471 708 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 CDC25AP30304 524 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 GYG1P46976 350 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 HINFPQ9BQA5 517 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 TFCP2L1Q9NZI6 479 aa15.55■□□□□ 0.08
GPC1-209ENST00000495100 ZNF215Q9UL58 517 aaPredicted RBP15.55■□□□□ 0.08
GPC1-209ENST00000495100 PDE4CQ08493 712 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 MYSM1Q5VVJ2 828 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
GPC1-209ENST00000495100 VAT1LQ9HCJ6 419 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 PFKFB1P16118 471 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 MAP3K12Q12852 859 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 CCDC102BQ68D86 513 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 SMYD4Q8IYR2 804 aaPredicted RBP15.54■□□□□ 0.08
GPC1-209ENST00000495100 EPC1Q9H2F5 836 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 SNW1Q13573 536 aaKnown RBP15.54■□□□□ 0.08
GPC1-209ENST00000495100 SART3Q15020 963 aaKnown RBP15.54■□□□□ 0.08
GPC1-209ENST00000495100 ANO1Q5XXA6 986 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 APPBP2Q92624 585 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 HELLSQ9NRZ9 838 aa15.54■□□□□ 0.08
GPC1-209ENST00000495100 CARMIL3Q8ND23 1372 aa15.53■□□□□ 0.08
GPC1-209ENST00000495100 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
GPC1-209ENST00000495100 POLR2DO15514 142 aaKnown RBP15.53■□□□□ 0.08
GPC1-209ENST00000495100 TOP1P11387 765 aaKnown RBP15.53■□□□□ 0.08
GPC1-209ENST00000495100 SSRP1Q08945 709 aaKnown RBP15.53■□□□□ 0.08
GPC1-209ENST00000495100 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
GPC1-209ENST00000495100 DESI2Q9BSY9 194 aa15.53■□□□□ 0.08
GPC1-209ENST00000495100 VPS54Q9P1Q0 977 aa15.53■□□□□ 0.08
GPC1-209ENST00000495100 IGHMBP2P38935 993 aaKnown RBP15.52■□□□□ 0.08
GPC1-209ENST00000495100 ADKP55263 362 aaKnown RBP15.52■□□□□ 0.08
GPC1-209ENST00000495100 ATP2B2Q01814 1243 aa15.52■□□□□ 0.08
GPC1-209ENST00000495100 PPARDQ03181 441 aa15.52■□□□□ 0.08
GPC1-209ENST00000495100 TEX35Q5T0J7 233 aa15.52■□□□□ 0.08
GPC1-209ENST00000495100 CYB5R4Q7L1T6 521 aa15.52■□□□□ 0.08
GPC1-209ENST00000495100 PRIMPOLQ96LW4 560 aa15.52■□□□□ 0.08
GPC1-209ENST00000495100 H7C1W4 665 aa15.52■□□□□ 0.07
GPC1-209ENST00000495100 TPM3P06753 285 aa15.52■□□□□ 0.07
GPC1-209ENST00000495100 TMEM87AQ8NBN3 555 aa15.52■□□□□ 0.07
GPC1-209ENST00000495100 LZTFL1Q9NQ48 299 aa15.52■□□□□ 0.07
GPC1-209ENST00000495100 FDPSP14324 419 aaKnown RBP15.51■□□□□ 0.07
GPC1-209ENST00000495100 PDE6AP16499 860 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 ZNF174Q15697 407 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 FAM47AQ5JRC9 791 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 KIF18AQ8NI77 898 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 NKX2-3Q8TAU0 364 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 NACAP1Q9BZK3 213 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 SLAIN2Q9P270 581 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 ANGEL1Q9UNK9 670 aaKnown RBP15.51■□□□□ 0.07
GPC1-209ENST00000495100 PCDH11XQ9BZA7 1347 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 PCDH11YQ9BZA8 1340 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 CDC27P30260 824 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 WTAPQ15007 396 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 LRRC8AQ8IWT6 810 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 GUCY1A2P33402 732 aa15.51■□□□□ 0.07
GPC1-209ENST00000495100 DIS3L2Q8IYB7 885 aaKnown RBP15.51■□□□□ 0.07
GPC1-209ENST00000495100 ERCC6LQ2NKX8 1250 aa15.5■□□□□ 0.07
GPC1-209ENST00000495100 FBXO18Q8NFZ0 1043 aa15.5■□□□□ 0.07
GPC1-209ENST00000495100 DNA2P51530 1060 aa15.5■□□□□ 0.07
GPC1-209ENST00000495100 FANCLQ9NW38 375 aa15.5■□□□□ 0.07
GPC1-209ENST00000495100 GNG11P61952 73 aa15.5■□□□□ 0.07
GPC1-209ENST00000495100 KIAA1468Q9P260 1216 aa15.5■□□□□ 0.07
GPC1-209ENST00000495100 ZNF335Q9H4Z2 1342 aaPredicted RBP15.49■□□□□ 0.07
GPC1-209ENST00000495100 SLC5A1P13866 664 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 CCT6AP40227 531 aaKnown RBP15.49■□□□□ 0.07
GPC1-209ENST00000495100 RTN1Q16799 776 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 JMYQ8N9B5 988 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 DSCC1Q9BVC3 393 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 V9GY48 417 aaPredicted RBP15.49■□□□□ 0.07
GPC1-209ENST00000495100 KCNG4Q8TDN1 519 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 FUCA2Q9BTY2 467 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 BLZF1Q9H2G9 400 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 ZSWIM5Q9P217 1185 aa15.49■□□□□ 0.07
GPC1-209ENST00000495100 FAM205CA6NFA0 338 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms