RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ESRRAP11474 423 aaPredicted RBP8.02□□□□□ -1.13
SMC4-224ENST00000494612 ITGB5P18084 799 aa8.02□□□□□ -1.13
SMC4-224ENST00000494612 NUTM2GQ5VZR2 741 aa8.02□□□□□ -1.13
SMC4-224ENST00000494612 PHLDB3Q6NSJ2 640 aa8.02□□□□□ -1.13
SMC4-224ENST00000494612 SNX29Q8TEQ0 813 aa8.02□□□□□ -1.13
SMC4-224ENST00000494612 F13BP05160 661 aa8.01□□□□□ -1.13
SMC4-224ENST00000494612 USP5P45974 858 aa8.01□□□□□ -1.13
SMC4-224ENST00000494612 EHHADHQ08426 723 aa8.01□□□□□ -1.13
SMC4-224ENST00000494612 EXOSC6Q5RKV6 272 aaKnown RBP8.01□□□□□ -1.13
SMC4-224ENST00000494612 C12orf50Q8NA57 414 aaPredicted RBP8.01□□□□□ -1.13
SMC4-224ENST00000494612 AGBL5Q8NDL9 886 aa8.01□□□□□ -1.13
SMC4-224ENST00000494612 METTL22Q9BUU2 404 aaPredicted RBP8.01□□□□□ -1.13
SMC4-224ENST00000494612 LATS2Q9NRM7 1088 aa8.01□□□□□ -1.13
SMC4-224ENST00000494612 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
SMC4-224ENST00000494612 FAM13AO94988 1023 aa8□□□□□ -1.13
SMC4-224ENST00000494612 NRSN2Q9GZP1 204 aa8□□□□□ -1.13
SMC4-224ENST00000494612 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
SMC4-224ENST00000494612 CYP4F12Q9HCS2 524 aa8□□□□□ -1.13
SMC4-224ENST00000494612 DRD2P14416 443 aa7.99□□□□□ -1.13
SMC4-224ENST00000494612 FKBP4Q02790 459 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMC4-224ENST00000494612 SHISA5Q8N114 240 aa7.99□□□□□ -1.13
SMC4-224ENST00000494612 GJD3Q8N144 294 aa7.99□□□□□ -1.13
SMC4-224ENST00000494612 ASAP3Q8TDY4 903 aa7.99□□□□□ -1.13
SMC4-224ENST00000494612 USP26Q9BXU7 913 aa7.99□□□□□ -1.13
SMC4-224ENST00000494612 BSDC1Q9NW68 430 aaPredicted RBP7.99□□□□□ -1.13
SMC4-224ENST00000494612 CYP26A1O43174 497 aa7.98□□□□□ -1.13
SMC4-224ENST00000494612 BRD1O95696 1058 aa7.98□□□□□ -1.13
SMC4-224ENST00000494612 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
SMC4-224ENST00000494612 AAMPQ13685 434 aa7.98□□□□□ -1.13
SMC4-224ENST00000494612 C2CD4AQ8NCU7 369 aaPredicted RBP7.98□□□□□ -1.13
SMC4-224ENST00000494612 GZF1Q9H116 711 aaPredicted RBP7.98□□□□□ -1.13
SMC4-224ENST00000494612 CCDC87Q9NVE4 849 aa7.98□□□□□ -1.13
SMC4-224ENST00000494612 AMOTL2Q9Y2J4 779 aa7.98□□□□□ -1.13
SMC4-224ENST00000494612 METTL12A8MUP2 240 aa7.97□□□□□ -1.13
SMC4-224ENST00000494612 NFKBIBQ15653 356 aa7.97□□□□□ -1.13
SMC4-224ENST00000494612 FBLN7Q53RD9 439 aa7.97□□□□□ -1.13
SMC4-224ENST00000494612 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
SMC4-224ENST00000494612 PAOXQ6QHF9 649 aa7.97□□□□□ -1.13
SMC4-224ENST00000494612 FLCNQ8NFG4 579 aa7.97□□□□□ -1.13
SMC4-224ENST00000494612 FAM95CA0A1B0GW59 222 aa7.96□□□□□ -1.14
SMC4-224ENST00000494612 GSTM4Q03013 218 aa7.96□□□□□ -1.14
SMC4-224ENST00000494612 SOX4Q06945 474 aaPredicted RBP7.96□□□□□ -1.14
SMC4-224ENST00000494612 ZNF648Q5T619 568 aaPredicted RBP7.96□□□□□ -1.14
SMC4-224ENST00000494612 LCE4AQ5TA78 99 aa7.96□□□□□ -1.14
SMC4-224ENST00000494612 FBLIM1Q8WUP2 373 aa7.96□□□□□ -1.14
SMC4-224ENST00000494612 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
SMC4-224ENST00000494612 DBX1A6NMT0 343 aa7.95□□□□□ -1.14
SMC4-224ENST00000494612 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
SMC4-224ENST00000494612 ZNF423Q2M1K9 1284 aa7.95□□□□□ -1.14
SMC4-224ENST00000494612 NFXL1Q6ZNB6 911 aa7.95□□□□□ -1.14
SMC4-224ENST00000494612 CCNJLQ8IV13 435 aa7.95□□□□□ -1.14
SMC4-224ENST00000494612 IVNS1ABPQ9Y6Y0 642 aa7.95□□□□□ -1.14
SMC4-224ENST00000494612 POLR3DP05423 398 aaPredicted RBP7.94□□□□□ -1.14
SMC4-224ENST00000494612 ADMP35318 185 aa7.94□□□□□ -1.14
SMC4-224ENST00000494612 USP11P51784 963 aa7.94□□□□□ -1.14
SMC4-224ENST00000494612 PKN1Q16512 942 aa7.94□□□□□ -1.14
SMC4-224ENST00000494612 GATA6Q92908 595 aa7.94□□□□□ -1.14
SMC4-224ENST00000494612 TCF12Q99081 682 aa7.94□□□□□ -1.14
SMC4-224ENST00000494612 A0A096LPE4 126 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 A0A1W2PP55 124 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 A0A1W2PPZ6 126 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 BIN1O00499 593 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 COL19A1Q14993 1142 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 GALNT12Q8IXK2 581 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 TBC1D32Q96NH3 1257 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 PRKAG2Q9UGJ0 569 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 MTMR7Q9Y216 660 aa7.93□□□□□ -1.14
SMC4-224ENST00000494612 CTSBP07858 339 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 GRIA4P48058 902 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 PCDH1Q08174 1060 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 KCNA1Q09470 495 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 ZNF124Q15973 351 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 ECM1Q16610 540 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 SPRED3Q2MJR0 410 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 ZAR1Q86SH2 424 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 CLEC4MQ9H2X3 399 aaPredicted RBP7.92□□□□□ -1.14
SMC4-224ENST00000494612 ANO2Q9NQ90 1003 aa7.92□□□□□ -1.14
SMC4-224ENST00000494612 ADH5P11766 374 aa7.91□□□□□ -1.14
SMC4-224ENST00000494612 MAOBP27338 520 aa7.91□□□□□ -1.14
SMC4-224ENST00000494612 SERPINB4P48594 390 aa7.91□□□□□ -1.14
SMC4-224ENST00000494612 YIPF2Q9BWQ6 316 aa7.91□□□□□ -1.14
SMC4-224ENST00000494612 KRTAP4-11Q9BYQ6 195 aa7.91□□□□□ -1.14
SMC4-224ENST00000494612 PAK6Q9NQU5 681 aaPredicted RBP7.91□□□□□ -1.14
SMC4-224ENST00000494612 PAPLNO95428 1278 aa7.9□□□□□ -1.14
SMC4-224ENST00000494612 ABL1P00519 1130 aa7.9□□□□□ -1.14
SMC4-224ENST00000494612 ZNF211Q13398 564 aaPredicted RBP7.9□□□□□ -1.14
SMC4-224ENST00000494612 LIN7BQ9HAP6 207 aa7.9□□□□□ -1.14
SMC4-224ENST00000494612 ACTL7BQ9Y614 415 aa7.9□□□□□ -1.14
SMC4-224ENST00000494612 FARP2O94887 1054 aaPredicted RBP7.89□□□□□ -1.15
SMC4-224ENST00000494612 CYP11A1P05108 521 aa7.89□□□□□ -1.15
SMC4-224ENST00000494612 KIAA0319Q5VV43 1072 aa7.89□□□□□ -1.15
SMC4-224ENST00000494612 DUSP27Q5VZP5 1158 aa7.89□□□□□ -1.15
SMC4-224ENST00000494612 SPOCD1Q6ZMY3 1216 aa7.89□□□□□ -1.15
SMC4-224ENST00000494612 CCER1Q8TC90 406 aaPredicted RBP7.89□□□□□ -1.15
SMC4-224ENST00000494612 TRIM56Q9BRZ2 755 aaKnown RBP7.89□□□□□ -1.15
SMC4-224ENST00000494612 GSX1Q9H4S2 264 aaPredicted RBP7.89□□□□□ -1.15
SMC4-224ENST00000494612 FAM170BA6NMN3 283 aa7.88□□□□□ -1.15
SMC4-224ENST00000494612 ICMTO60725 284 aa7.88□□□□□ -1.15
SMC4-224ENST00000494612 POU4F3Q15319 338 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms