RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 ZNF70Q9UC06 446 aaPredicted RBP12.8□□□□□ -0.36
SOX2-OT-215ENST00000493521 TTF2Q9UNY4 1162 aaKnown RBP12.8□□□□□ -0.36
SOX2-OT-215ENST00000493521 TNNQ9UQP3 1299 aa12.8□□□□□ -0.36
SOX2-OT-215ENST00000493521 TCP10L2B9ZVM9 353 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 GPR25O00155 361 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 MLLT1Q03111 559 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 CTU1Q7Z7A3 348 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 WNK4Q96J92 1243 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 TEPSINQ96N21 525 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 PTPN18Q99952 460 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 TMEM39BQ9GZU3 492 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 LAMB1P07942 1786 aa12.79□□□□□ -0.36
SOX2-OT-215ENST00000493521 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 CRKP46108 304 aa12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 FKBP1AP62942 108 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 MAP3K11Q16584 847 aa12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 METTL24Q5JXM2 366 aa12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 C20orf194Q5TEA3 1177 aa12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 ARMC9Q7Z3E5 817 aa12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 DZIP1LQ8IYY4 767 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-215ENST00000493521 FGFR2P21802 821 aa12.77□□□□□ -0.37
SOX2-OT-215ENST00000493521 NF2P35240 595 aa12.77□□□□□ -0.37
SOX2-OT-215ENST00000493521 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
SOX2-OT-215ENST00000493521 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
SOX2-OT-215ENST00000493521 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.37
SOX2-OT-215ENST00000493521 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.37
SOX2-OT-215ENST00000493521 PA2G4Q9UQ80 394 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-215ENST00000493521 PDE8BO95263 885 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 SLURP2P0DP57 97 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 ALDH1L2Q3SY69 923 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 IFNL1Q8IU54 200 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 EXOC6Q8TAG9 804 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 SLC10A4Q96EP9 437 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 CRBNQ96SW2 442 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 SIL1Q9H173 461 aa12.76□□□□□ -0.37
SOX2-OT-215ENST00000493521 PTPRCP08575 1304 aa12.75□□□□□ -0.37
SOX2-OT-215ENST00000493521 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
SOX2-OT-215ENST00000493521 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-215ENST00000493521 ADORA1P30542 326 aa12.74□□□□□ -0.37
SOX2-OT-215ENST00000493521 APOBEC3HQ6NTF7 200 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-215ENST00000493521 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
SOX2-OT-215ENST00000493521 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
SOX2-OT-215ENST00000493521 MYH13Q9UKX3 1938 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 FKTNO75072 461 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 MMP14P50281 582 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 CRHR2Q13324 411 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 VGLL4Q14135 290 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 MEIS3Q99687 375 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 PPP2R3BQ9Y5P8 575 aa12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-215ENST00000493521 EYA2O00167 538 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 MYO1BO43795 1136 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 PPP1R12BO60237 982 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 PRDX5P30044 214 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 SREBF2Q12772 1141 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 CD99L2Q8TCZ2 262 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 BRI3BPQ8WY22 251 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 ZKSCAN4Q969J2 545 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 CFHR5Q9BXR6 569 aa12.72□□□□□ -0.37
SOX2-OT-215ENST00000493521 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 MANSC4A6NHS7 340 aaPredicted RBP12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 PHKA1P46020 1223 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 NFIAQ12857 509 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 B4GALNT3Q6L9W6 998 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 MIGA2Q7L4E1 593 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 VPS37DQ86XT2 251 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 FAM43AQ8N2R8 423 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 TRIM17Q9Y577 477 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 SNCAIPQ9Y6H5 919 aa12.71□□□□□ -0.37
SOX2-OT-215ENST00000493521 KIF16BQ96L93 1317 aa12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 ZBTB48P10074 688 aaPredicted RBP12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 ANKRD13AQ8IZ07 590 aa12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 DAGLAQ9Y4D2 1042 aa12.7□□□□□ -0.38
SOX2-OT-215ENST00000493521 IPO8O15397 1037 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-215ENST00000493521 TRIM27P14373 513 aa12.69□□□□□ -0.38
SOX2-OT-215ENST00000493521 INPP5BP32019 993 aa12.69□□□□□ -0.38
SOX2-OT-215ENST00000493521 TCP10Q12799 353 aa12.69□□□□□ -0.38
SOX2-OT-215ENST00000493521 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
SOX2-OT-215ENST00000493521 FBXO46Q6PJ61 603 aaPredicted RBP12.69□□□□□ -0.38
SOX2-OT-215ENST00000493521 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms