RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 NAV1Q8NEY1 1877 aa10.84□□□□□ -0.67
SMARCC1-208ENST00000492896 MYH15Q9Y2K3 1946 aa10.84□□□□□ -0.67
SMARCC1-208ENST00000492896 WDR33Q9C0J8 1336 aaKnown RBP10.84□□□□□ -0.67
SMARCC1-208ENST00000492896 KLRG2A4D1S0 409 aaPredicted RBP10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 PATL2C9JE40 543 aaKnown RBP10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 BBOX1O75936 387 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 ATP2B4P23634 1241 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 CHAF1AQ13111 956 aaPredicted RBP10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 C15orf52Q6ZUT6 534 aaKnown RBP10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 RALYLQ86SE5 291 aaKnown RBP10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 LCORLQ8N3X6 602 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 NAPBQ9H115 298 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 ARMT1Q9H993 441 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 ZDHHC9Q9Y397 364 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 PARP3Q9Y6F1 533 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 CDK5RAP2Q96SN8 1893 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 WDR19Q8NEZ3 1342 aa10.83□□□□□ -0.68
SMARCC1-208ENST00000492896 MAGEB6P1A0A0J9YX57 407 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 PPEF1O14829 653 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 UFL1O94874 794 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 MMP10P09238 476 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 GJB2P29033 226 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 GPSM2P81274 684 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 EXOSC10Q01780 885 aaKnown RBP10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 NAA16Q6N069 864 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 TMED8Q6PL24 325 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 ZNF804AQ7Z570 1209 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 MB21D2Q8IYB1 491 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 BRF1Q92994 677 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 GTF3C6Q969F1 213 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 BRIP1Q9BX63 1249 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 AGXT2Q9BYV1 514 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 NACAP1Q9BZK3 213 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 EPB41L4AQ9HCS5 686 aaPredicted RBP10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 SLC4A4Q9Y6R1 1079 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 DLEC1Q9Y238 1755 aa10.82□□□□□ -0.68
SMARCC1-208ENST00000492896 ECM29Q5VYK3 1845 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 IGSF3O75054 1194 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 MCM5P33992 734 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 TDO2P48775 406 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 TRDNQ13061 729 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 SPTY2D1Q68D10 685 aaPredicted RBP10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 IFNL3Q8IZI9 196 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 MIGA1Q8NAN2 632 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 STK32BQ9NY57 414 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 SALL1Q9NSC2 1324 aa10.81□□□□□ -0.68
SMARCC1-208ENST00000492896 GSG1L2A8MUP6 293 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 PRC1O43663 620 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 STX6O43752 255 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 TRAK2O60296 914 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 PFKFB2O60825 505 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 NPR1P16066 1061 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 PDE6BP35913 854 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 APOBRQ0VD83 1088 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 STK3Q13188 491 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 FOXD4L5Q5VV16 416 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 MSL1Q68DK7 614 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 MCTP1Q6DN14 999 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 ADGRA1Q86SQ6 560 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 SLC51AQ86UW1 340 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 TXNRD3Q86VQ6 643 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 FBXL16Q8N461 479 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 TDRD7Q8NHU6 1098 aaKnown RBP10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 WDR66Q8TBY9 1149 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 CHMP4CQ96CF2 233 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 CAMKK2Q96RR4 588 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 NBPF3Q9H094 633 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 PODXL2Q9NZ53 605 aa10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 NSFL1CQ9UNZ2 370 aaKnown RBP10.8□□□□□ -0.68
SMARCC1-208ENST00000492896 FOCADQ5VW36 1801 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 PRKAB2O43741 272 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 ZSCAN22P10073 491 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 SRGNP10124 158 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 PDCP20941 246 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 SYT1P21579 422 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 MECOMQ03112 1051 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 SLC15A2Q16348 729 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 DZIP1Q86YF9 867 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 SP8Q8IXZ3 490 aa10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 NSUN4Q96CB9 384 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 GPR101Q96P66 508 aaPredicted RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 RIOK1Q9BRS2 568 aaKnown RBP10.79□□□□□ -0.68
SMARCC1-208ENST00000492896 ALDH1B1P30837 517 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 ANTXR2P58335 489 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 SCRN1Q12765 414 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 SF3B2Q13435 895 aaKnown RBP10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 GSE1Q14687 1217 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 CHST3Q7LGC8 479 aa10.78□□□□□ -0.68
SMARCC1-208ENST00000492896 TBC1D16Q8TBP0 767 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms