RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 TEPSINQ96N21 525 aa11.43□□□□□ -0.58
GTF3C5-210ENST00000489842 EYA2O00167 538 aa11.42□□□□□ -0.58
GTF3C5-210ENST00000489842 IGF2BP3O00425 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
GTF3C5-210ENST00000489842 ADORA1P30542 326 aa11.42□□□□□ -0.58
GTF3C5-210ENST00000489842 RARSP54136 660 aaKnown RBP11.42□□□□□ -0.58
GTF3C5-210ENST00000489842 CAP1Q01518 475 aa11.42□□□□□ -0.58
GTF3C5-210ENST00000489842 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
GTF3C5-210ENST00000489842 TNRC18O15417 2968 aaPredicted RBP11.41□□□□□ -0.58
GTF3C5-210ENST00000489842 GPR25O00155 361 aa11.41□□□□□ -0.58
GTF3C5-210ENST00000489842 MYO1BO43795 1136 aa11.41□□□□□ -0.58
GTF3C5-210ENST00000489842 BCAR3O75815 825 aa11.41□□□□□ -0.58
GTF3C5-210ENST00000489842 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
GTF3C5-210ENST00000489842 SLURP2P0DP57 97 aa11.41□□□□□ -0.58
GTF3C5-210ENST00000489842 PPP1R12BO60237 982 aaPredicted RBP11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 PHKA1P46020 1223 aa11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 PUM3Q15397 648 aaKnown RBP11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 DIXDC1Q155Q3 683 aa11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 MAP3K11Q16584 847 aa11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 CAVIN4Q5BKX8 364 aa11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 CTU1Q7Z7A3 348 aaKnown RBP11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 MIER1Q8N108 512 aa11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 PTPN18Q99952 460 aa11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
GTF3C5-210ENST00000489842 ZSWIM8A7E2V4 1837 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 CCER2I3L3R5 266 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 IFIT1P09914 478 aaKnown RBP11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 PRDX5P30044 214 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 MMP14P50281 582 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 CLUAP1Q96AJ1 413 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 OPTNQ96CV9 577 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
GTF3C5-210ENST00000489842 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 SLC5A1P13866 664 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 RGS19P49795 217 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 TIMM10P62072 90 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 MLLT1Q03111 559 aaPredicted RBP11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 TCP10Q12799 353 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 ATP2B3Q16720 1220 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 SUPT20HL1Q3ZLR7 823 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 ZFPM1Q8IX07 1006 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 LPIN2Q92539 896 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 PPP2R3BQ9Y5P8 575 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 LAMB1P07942 1786 aa11.38□□□□□ -0.59
GTF3C5-210ENST00000489842 IREB2P48200 963 aaKnown RBP11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 SREBF2Q12772 1141 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 NFIAQ12857 509 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 CRHR2Q13324 411 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 VGLL4Q14135 290 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 MIGA2Q7L4E1 593 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 ZKSCAN4Q969J2 545 aaPredicted RBP11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 TEKT1Q969V4 418 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 DAGLAQ9Y4D2 1042 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 AK9Q5TCS8 1911 aa11.37□□□□□ -0.59
GTF3C5-210ENST00000489842 MANSC4A6NHS7 340 aaPredicted RBP11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 FKTNO75072 461 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 TRIM27P14373 513 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 TFCP2Q12800 502 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 ANKRD13AQ8IZ07 590 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.36□□□□□ -0.593e-14■■■■□ 25.3
GTF3C5-210ENST00000489842 CD99L2Q8TCZ2 262 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 TBC1D22AQ8WUA7 517 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 BRI3BPQ8WY22 251 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 ZDHHC15Q96MV8 337 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
GTF3C5-210ENST00000489842 MYH2Q9UKX2 1941 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 PNMA6EA0A0J9YXQ4 647 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 INPP5BP32019 993 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 MAP3K9P80192 1104 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 INTS3Q68E01 1043 aaKnown RBP11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 CDC42EP5Q6NZY7 148 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 PI16Q6UXB8 463 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 SNCAIPQ9Y6H5 919 aa11.35□□□□□ -0.59
GTF3C5-210ENST00000489842 HTTP42858 3142 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 SRGAP3O43295 1099 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 CIAO1O76071 339 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 ZBTB48P10074 688 aaPredicted RBP11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 CCDC102BQ68D86 513 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 FAM43AQ8N2R8 423 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 TMEM57Q8N5G2 664 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 WRNIP1Q96S55 665 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 COPRSQ9NQ92 184 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
GTF3C5-210ENST00000489842 CCL15-CCL14A0A0B4J2E2 113 aa11.33□□□□□ -0.6
GTF3C5-210ENST00000489842 CT47B1P0C2W7 299 aaPredicted RBP11.33□□□□□ -0.6
GTF3C5-210ENST00000489842 IL15P40933 162 aaPredicted RBP11.33□□□□□ -0.6
GTF3C5-210ENST00000489842 TNNI2P48788 182 aa11.33□□□□□ -0.6
GTF3C5-210ENST00000489842 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms